Detail information of GWHGAAZE029622


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010087417.11.5212E-135ATP phosphoribosyltransferase [Morus notabilis]
COGYP_004175002.14E-43ATP phosphoribosyltransferase
Swissprottr|Q8GSJ1|HIS1B_ARATH6E-124ATP phosphoribosyltransferase 2, chloroplastic (Precursor)
trEMBLtr|W9QK95|W9QK95_9ROSA6E-136ATP phosphoribosyltransferase {ECO:0000313|EMBL:EXB29027.1}
TAIR10AT1G09795.15E-95ATP phosphoribosyl transferase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3001929230030151-
GWHAAZE00000009mRNA3001929230030151-
GWHAAZE00000009exon3003007230030151-
GWHAAZE00000009exon3002446330024528-
GWHAAZE00000009exon3002361830023725-
GWHAAZE00000009exon3002340230023485-
GWHAAZE00000009exon3002151230021613-
GWHAAZE00000009exon3002128530021387-
GWHAAZE00000009exon3002073930020824-
GWHAAZE00000009exon3002025930020339-
GWHAAZE00000009exon3002001530020134-
GWHAAZE00000009exon3001929230019387-
GWHAAZE00000009five_prime_UTR3003007230030151-
GWHAAZE00000009five_prime_UTR3002446330024528-
GWHAAZE00000009five_prime_UTR3002369030023725-
GWHAAZE00000009CDS3002361830023689-
GWHAAZE00000009CDS3002340230023485-
GWHAAZE00000009CDS3002151230021613-
GWHAAZE00000009CDS3002128530021387-
GWHAAZE00000009CDS3002073930020824-
GWHAAZE00000009CDS3002025930020339-
GWHAAZE00000009CDS3002001530020134-
GWHAAZE00000009CDS3001929230019387-
Transcript Sequence

Network for GWHGAAZE029622

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01634.19HisG111131.90E-24
PF08029.12HisG_C1492297.70E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00765hisG Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Histidine metabolismmap00340

Gene Ontology

GO term OntologyName
GO:0000105biological_processhistidine biosynthetic process
GO:0005737cellular_componentcytoplasm
GO:0003879molecular_functionATP phosphoribosyltransferase activity
GO:0000287molecular_functionmagnesium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf50.529
SRR3591706second leaf52.278
SRR3591707mature leaf42.227
SRR3591708Shoot apex65.125
SRR3591709Stem36.689
SRR3591710White floral bud36.071
SRR3591711White flower46.111
SRR3591712Green floral bud50.102
SRR3591713Yellow flower43.228
SRP173429 SRR8316895Juvenile bud stage 30.057
SRR8316896Juvenile bud stage 43.204
SRR8316897Juvenile bud stage 17.103
SRR8316894Third green stage 17.106
SRR8316900Third green stage 45.884
SRR8316901Third green stage 47.837
SRR8316898Complete white stage 11.281
SRR8316899Complete white stage 47.143
SRR8316903Complete white stage 20.261
SRR8316902Silver flowering stage10.549
SRR8316904Silver flowering stage15.899
SRR8316905Silver flowering stage6.837
SRR8316906Gold flowering stage 24.449
SRR8316907Gold flowering stage 23.475
SRR8316908Gold flowering stage 26.596
SRP132670SRR6706286Control39.226
SRR6706287Light intensity 50%46.168
SRR6706288Light intensity 20%51.518
CNP0000432CNS0095592Slightly white alabastrum(diploid) 130.979
CNS0095593Slightly white alabastrum(diploid) 235.771
CNS0095594Slightly white alabastrum(diploid) 328.563
CNS0095595Whole white alabastrum(diploid) 225.864
CNS0095596Whole white alabastrum(diploid) 331.986
CNS0095597Whole white alabastrum(diploid) 419.820
CNS0095598Silvery flower (diploied) 123.418
CNS0095599Silvery flower (diploied) 227.209
CNS0095600Silvery flower (diploied) 325.494
CNS0095601Golden flower (diploid) 126.419
CNS0095602Golden flower (diploid) 226.339
CNS0095603Golden flower (diploid) 325.685
CNS0095604Slightly white alabastrum(tetraploid) 130.469
CNS0095605Slightly white alabastrum(tetraploid) 227.395
CNS0095606Slightly white alabastrum(tetraploid) 342.883
CNS0095607Whole white alabastrum(tetraploid) 119.932
CNS0095608Whole white alabastrum(tetraploid) 213.541
CNS0095609Whole white alabastrum(tetraploid) 329.495
CNS0095610Silvery flower (tetraploid) 129.965
CNS0095611Silvery flower (tetraploid) 229.628
CNS0095612Silvery flower (tetraploid) 319.491
CNS0095613Golden flower (tetraploid) 115.542
CNS0095614Golden flower (tetraploid) 224.192
CNS0095615Golden flower (tetraploid) 311.044
CRA001975CRR073297Stem 161.178
CRR073298Stem 253.064
CRR073299Stem 355.791
CRR073300Leaf 158.421
CRR073301Leaf 253.477
CRR073302Leaf 355.446
CRR073303Juvenile bud 158.008
CRR073304Juvenile bud 241.684
CRR073305Juvenile bud 355.387
CRR073306Third green 110.984
CRR073307Third green 28.637
CRR073308Third green 38.977
CRR073309Second white 121.970
CRR073310Second white 220.147
CRR073311Second white 317.163
CRR073312Silver flowering 117.284
CRR073313Silver flowering 224.676
CRR073314Silver flowering 315.991
CRR073315Gold flowering 137.637
CRR073316Gold flowering 248.501
CRR073317Gold flowering 343.732
CRR073318Tawny withering 133.987
CRR073319Tawny withering 225.787
CRR073320Tawny withering 335.322