Detail information of GWHGAAZE029626


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011092328.19.3978E-175PREDICTED: uncharacterized zinc finger protein At4g06634 [Sesamum indicum]
COGYP_004117948.15E-13zinc finger C2H2-type domain-containing protein
Swissprottr|Q2V3L3|Y4634_ARATH4E-135Uncharacterized zinc finger protein At4g06634
trEMBLtr|I3SI97|I3SI97_MEDTR7E-175Uncharacterized protein {ECO:0000313|EMBL:AFK39989.1}
TAIR10AT4G06634.14E-95zinc finger (C2H2 type) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3010020530105130+
GWHAAZE00000009mRNA3010020530105130+
GWHAAZE00000009exon3010020530100262+
GWHAAZE00000009exon3010162230101821+
GWHAAZE00000009exon3010260130102690+
GWHAAZE00000009exon3010313430103277+
GWHAAZE00000009exon3010451530105130+
GWHAAZE00000009CDS3010020530100262+
GWHAAZE00000009CDS3010162230101821+
GWHAAZE00000009CDS3010260130102690+
GWHAAZE00000009CDS3010313430103277+
GWHAAZE00000009CDS3010451530105087+
GWHAAZE00000009three_prime_UTR3010508830105130+
Transcript Sequence

Network for GWHGAAZE029626

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00096.27zf-C2H21071310.00041
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf25.710
SRR3591706second leaf25.954
SRR3591707mature leaf35.112
SRR3591708Shoot apex31.732
SRR3591709Stem26.495
SRR3591710White floral bud30.913
SRR3591711White flower38.459
SRR3591712Green floral bud36.178
SRR3591713Yellow flower41.894
SRP173429 SRR8316895Juvenile bud stage 22.881
SRR8316896Juvenile bud stage 32.453
SRR8316897Juvenile bud stage 11.756
SRR8316894Third green stage 13.154
SRR8316900Third green stage 38.305
SRR8316901Third green stage 34.175
SRR8316898Complete white stage 14.543
SRR8316899Complete white stage 46.443
SRR8316903Complete white stage 19.680
SRR8316902Silver flowering stage14.652
SRR8316904Silver flowering stage18.386
SRR8316905Silver flowering stage9.682
SRR8316906Gold flowering stage 34.000
SRR8316907Gold flowering stage 35.302
SRR8316908Gold flowering stage 36.167
SRP132670SRR6706286Control44.251
SRR6706287Light intensity 50%40.145
SRR6706288Light intensity 20%41.662
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.462
CNS0095593Slightly white alabastrum(diploid) 225.562
CNS0095594Slightly white alabastrum(diploid) 321.606
CNS0095595Whole white alabastrum(diploid) 221.031
CNS0095596Whole white alabastrum(diploid) 321.371
CNS0095597Whole white alabastrum(diploid) 417.549
CNS0095598Silvery flower (diploied) 126.630
CNS0095599Silvery flower (diploied) 225.641
CNS0095600Silvery flower (diploied) 331.333
CNS0095601Golden flower (diploid) 126.854
CNS0095602Golden flower (diploid) 226.753
CNS0095603Golden flower (diploid) 330.003
CNS0095604Slightly white alabastrum(tetraploid) 124.852
CNS0095605Slightly white alabastrum(tetraploid) 222.846
CNS0095606Slightly white alabastrum(tetraploid) 340.827
CNS0095607Whole white alabastrum(tetraploid) 115.223
CNS0095608Whole white alabastrum(tetraploid) 212.797
CNS0095609Whole white alabastrum(tetraploid) 329.266
CNS0095610Silvery flower (tetraploid) 130.588
CNS0095611Silvery flower (tetraploid) 232.497
CNS0095612Silvery flower (tetraploid) 330.269
CNS0095613Golden flower (tetraploid) 125.028
CNS0095614Golden flower (tetraploid) 230.106
CNS0095615Golden flower (tetraploid) 330.667
CRA001975CRR073297Stem 147.503
CRR073298Stem 243.472
CRR073299Stem 352.419
CRR073300Leaf 146.759
CRR073301Leaf 247.739
CRR073302Leaf 341.700
CRR073303Juvenile bud 146.787
CRR073304Juvenile bud 241.278
CRR073305Juvenile bud 343.900
CRR073306Third green 124.041
CRR073307Third green 222.386
CRR073308Third green 325.092
CRR073309Second white 122.753
CRR073310Second white 225.691
CRR073311Second white 322.816
CRR073312Silver flowering 124.400
CRR073313Silver flowering 216.501
CRR073314Silver flowering 319.796
CRR073315Gold flowering 155.626
CRR073316Gold flowering 265.657
CRR073317Gold flowering 339.949
CRR073318Tawny withering 139.684
CRR073319Tawny withering 231.242
CRR073320Tawny withering 335.082