Detail information of GWHGAAZE029688


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAGT01909.15.3553E-07NAC transcription factor [Camellia sinensis]
trEMBLtr|S5XG86|S5XG86_CAMSI0.0000002NAC transcription factor {ECO:0000313|EMBL:AGT01909.1}
TAIR10AT4G28530.10.0002NAC domain containing protein 74

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3115297631153654-
GWHAAZE00000009mRNA3115297631153654-
GWHAAZE00000009exon3115297631153107-
GWHAAZE00000009exon3115320831153654-
GWHAAZE00000009CDS3115320831153654-
GWHAAZE00000009CDS3115297631153107-
Transcript Sequence

Network for GWHGAAZE029688

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.16NAM151433.30E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.422
SRR3591706second leaf1.506
SRR3591707mature leaf2.098
SRR3591708Shoot apex3.319
SRR3591709Stem3.096
SRR3591710White floral bud0.564
SRR3591711White flower0.673
SRR3591712Green floral bud1.269
SRR3591713Yellow flower0.143
SRP173429 SRR8316895Juvenile bud stage 1.686
SRR8316896Juvenile bud stage 3.086
SRR8316897Juvenile bud stage 1.780
SRR8316894Third green stage 0.594
SRR8316900Third green stage 1.440
SRR8316901Third green stage 1.755
SRR8316898Complete white stage 0.613
SRR8316899Complete white stage 4.313
SRR8316903Complete white stage 1.603
SRR8316902Silver flowering stage0.732
SRR8316904Silver flowering stage1.056
SRR8316905Silver flowering stage0.614
SRR8316906Gold flowering stage 2.071
SRR8316907Gold flowering stage 0.692
SRR8316908Gold flowering stage 2.928
SRP132670SRR6706286Control0.775
SRR6706287Light intensity 50%0.942
SRR6706288Light intensity 20%0.807
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.088
CNS0095593Slightly white alabastrum(diploid) 23.239
CNS0095594Slightly white alabastrum(diploid) 33.775
CNS0095595Whole white alabastrum(diploid) 22.905
CNS0095596Whole white alabastrum(diploid) 33.282
CNS0095597Whole white alabastrum(diploid) 44.762
CNS0095598Silvery flower (diploied) 15.720
CNS0095599Silvery flower (diploied) 23.753
CNS0095600Silvery flower (diploied) 31.884
CNS0095601Golden flower (diploid) 14.370
CNS0095602Golden flower (diploid) 23.790
CNS0095603Golden flower (diploid) 32.870
CNS0095604Slightly white alabastrum(tetraploid) 13.511
CNS0095605Slightly white alabastrum(tetraploid) 21.989
CNS0095606Slightly white alabastrum(tetraploid) 32.886
CNS0095607Whole white alabastrum(tetraploid) 13.184
CNS0095608Whole white alabastrum(tetraploid) 22.912
CNS0095609Whole white alabastrum(tetraploid) 32.279
CNS0095610Silvery flower (tetraploid) 11.399
CNS0095611Silvery flower (tetraploid) 22.119
CNS0095612Silvery flower (tetraploid) 33.116
CNS0095613Golden flower (tetraploid) 13.917
CNS0095614Golden flower (tetraploid) 23.816
CNS0095615Golden flower (tetraploid) 33.829
CRA001975CRR073297Stem 12.410
CRR073298Stem 22.505
CRR073299Stem 30.557
CRR073300Leaf 12.560
CRR073301Leaf 23.132
CRR073302Leaf 31.673
CRR073303Juvenile bud 10.427
CRR073304Juvenile bud 20.230
CRR073305Juvenile bud 31.317
CRR073306Third green 10.685
CRR073307Third green 20.224
CRR073308Third green 30.211
CRR073309Second white 10.155
CRR073310Second white 20.538
CRR073311Second white 30.846
CRR073312Silver flowering 10.085
CRR073313Silver flowering 20.403
CRR073314Silver flowering 30.175
CRR073315Gold flowering 10.080
CRR073316Gold flowering 20.488
CRR073317Gold flowering 30.000
CRR073318Tawny withering 12.524
CRR073319Tawny withering 22.559
CRR073320Tawny withering 30.709