Detail information of GWHGAAZE029704


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3139445531395914-
GWHAAZE00000009mRNA3139445531395914-
GWHAAZE00000009exon3139445531394696-
GWHAAZE00000009exon3139480231395219-
GWHAAZE00000009exon3139577731395914-
GWHAAZE00000009five_prime_UTR3139577731395914-
GWHAAZE00000009five_prime_UTR3139483231395219-
GWHAAZE00000009CDS3139480231394831-
GWHAAZE00000009CDS3139448731394696-
GWHAAZE00000009three_prime_UTR3139445531394486-
Transcript Sequence

Network for GWHGAAZE029704

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01955carB, CPA2 Metabolic pathways map01100
Pyrimidine metabolismmap00240
Alanine, aspartate and glutamate metabolismmap00250

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.429
SRR3591711White flower0.428
SRR3591712Green floral bud1.011
SRR3591713Yellow flower0.067
SRP173429 SRR8316895Juvenile bud stage 0.485
SRR8316896Juvenile bud stage 1.987
SRR8316897Juvenile bud stage 0.870
SRR8316894Third green stage 0.317
SRR8316900Third green stage 0.944
SRR8316901Third green stage 1.327
SRR8316898Complete white stage 0.012
SRR8316899Complete white stage 1.632
SRR8316903Complete white stage 0.722
SRR8316902Silver flowering stage0.232
SRR8316904Silver flowering stage0.338
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.185
SRR8316907Gold flowering stage 0.986
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.714
SRR6706287Light intensity 50%0.817
SRR6706288Light intensity 20%0.960
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.361
CNS0095593Slightly white alabastrum(diploid) 21.211
CNS0095594Slightly white alabastrum(diploid) 32.025
CNS0095595Whole white alabastrum(diploid) 21.445
CNS0095596Whole white alabastrum(diploid) 30.855
CNS0095597Whole white alabastrum(diploid) 41.120
CNS0095598Silvery flower (diploied) 10.307
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.282
CNS0095601Golden flower (diploid) 10.378
CNS0095602Golden flower (diploid) 20.305
CNS0095603Golden flower (diploid) 30.184
CNS0095604Slightly white alabastrum(tetraploid) 11.872
CNS0095605Slightly white alabastrum(tetraploid) 23.720
CNS0095606Slightly white alabastrum(tetraploid) 32.725
CNS0095607Whole white alabastrum(tetraploid) 12.439
CNS0095608Whole white alabastrum(tetraploid) 20.603
CNS0095609Whole white alabastrum(tetraploid) 31.302
CNS0095610Silvery flower (tetraploid) 10.477
CNS0095611Silvery flower (tetraploid) 21.076
CNS0095612Silvery flower (tetraploid) 30.479
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.224
CNS0095615Golden flower (tetraploid) 30.058
CRA001975CRR073297Stem 10.916
CRR073298Stem 20.833
CRR073299Stem 30.090
CRR073300Leaf 10.359
CRR073301Leaf 20.939
CRR073302Leaf 30.104
CRR073303Juvenile bud 10.212
CRR073304Juvenile bud 20.141
CRR073305Juvenile bud 31.736
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.120
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.068