Gene detail

Detail information of GWHGAAZE029705

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CAN65151.1	1.5052E-60	hypothetical protein VITISV_019619 [Vitis vinifera]
Swissprot	tr\|Q9LES3\|AI5L2_ARATH	1E-22	ABSCISIC ACID-INSENSITIVE 5-like protein 2
trEMBL	tr\|A5B1F7\|A5B1F7_VITVI	6E-61	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN65151.1}
TAIR10	AT2G41070.3	4E-14	Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	31507822	31508481	+
GWHAAZE00000009	mRNA	31507822	31508481	+
GWHAAZE00000009	exon	31507822	31508481	+
GWHAAZE00000009	CDS	31507822	31508481	+

Transcript Sequence
>GWHTAAZE029739 ATGGCGTCGTCGAAGGTGATGGCGTCTACATCACCGACCAATCCGGATCTGCCACGTATATCTGACCTACAAACCGATCAGAGCAAGAATTTTGGGTCTATTGGGTCTATGAACATGGACGAGCTGCTCAAGAACATCTATTCCGATCCGGAGCCTTTTCCGGCCGATGCGGTCGCCGCCGGTAATGGCTCCGTCGATGGGAGTTTCTCGCTGCCGAAGAATGTCGGCAACAAGTCCGTCGACGAGGTCTGGAACGATATCGTCGCCGGAGGTAGCCGAGATCATGCGCCGGCTCCGGGGATGACGCTGGAGGATTTTCTGACGAAGGCCGGGGCTGTTAGGGAGGAGGAAGTGAGGATGACGGAGATTCCGCCGGCGCCGGCGGGGTTTGGGGTTGATCCGATGGTGAATGCTTCTCAATTTCACGCTACTCCGGGGTTCTGTGTTGAATCGGTGGGATTTGGGAATGAAAATGTTTCTGTTGTACCGGCCTCCGGCGGCGGAGTTGGTGGGAGGGGGAAGAGGAGGGTGGTGGAGGAGCCGCCGGTGGATAAGGCGACGCAGCAGAAACAGAGAAGGATGATTAAGAACAGAGAGTCGGCGGCAAGATCAAGGGAGAGGAAACAGGTTTTGATAGGAGATTTGTTTGGATTGAGTTAA

Network for GWHGAAZE029705

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00170.22	bZIP_1	187	210	8.00E-07

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	pathway	mapID
K14432	ABF	Plant hormone signal transduction	map04075

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	19.477
	SRR3591706	second leaf	5.883
	SRR3591707	mature leaf	7.121
	SRR3591708	Shoot apex	14.456
	SRR3591709	Stem	21.302
	SRR3591710	White floral bud	16.799
	SRR3591711	White flower	18.297
	SRR3591712	Green floral bud	13.015
	SRR3591713	Yellow flower	13.423
SRP173429	SRR8316895	Juvenile bud stage	14.017
	SRR8316896	Juvenile bud stage	16.133
	SRR8316897	Juvenile bud stage	6.644
	SRR8316894	Third green stage	5.773
	SRR8316900	Third green stage	15.581
	SRR8316901	Third green stage	17.513
	SRR8316898	Complete white stage	5.147
	SRR8316899	Complete white stage	23.609
	SRR8316903	Complete white stage	9.032
	SRR8316902	Silver flowering stage	6.367
	SRR8316904	Silver flowering stage	7.664
	SRR8316905	Silver flowering stage	3.916
	SRR8316906	Gold flowering stage	8.855
	SRR8316907	Gold flowering stage	12.166
	SRR8316908	Gold flowering stage	11.434
SRP132670	SRR6706286	Control	31.463
	SRR6706287	Light intensity 50%	25.420
	SRR6706288	Light intensity 20%	23.799
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	17.537
	CNS0095593	Slightly white alabastrum(diploid) 2	10.133
	CNS0095594	Slightly white alabastrum(diploid) 3	13.767
	CNS0095595	Whole white alabastrum(diploid) 2	19.398
	CNS0095596	Whole white alabastrum(diploid) 3	17.995
	CNS0095597	Whole white alabastrum(diploid) 4	22.675
	CNS0095598	Silvery flower (diploied) 1	13.587
	CNS0095599	Silvery flower (diploied) 2	9.693
	CNS0095600	Silvery flower (diploied) 3	15.168
	CNS0095601	Golden flower (diploid) 1	13.969
	CNS0095602	Golden flower (diploid) 2	15.988
	CNS0095603	Golden flower (diploid) 3	17.647
	CNS0095604	Slightly white alabastrum(tetraploid) 1	15.789
	CNS0095605	Slightly white alabastrum(tetraploid) 2	16.978
	CNS0095606	Slightly white alabastrum(tetraploid) 3	23.153
	CNS0095607	Whole white alabastrum(tetraploid) 1	17.665
	CNS0095608	Whole white alabastrum(tetraploid) 2	14.163
	CNS0095609	Whole white alabastrum(tetraploid) 3	16.397
	CNS0095610	Silvery flower (tetraploid) 1	20.822
	CNS0095611	Silvery flower (tetraploid) 2	11.582
	CNS0095612	Silvery flower (tetraploid) 3	8.117
	CNS0095613	Golden flower (tetraploid) 1	7.968
	CNS0095614	Golden flower (tetraploid) 2	15.983
	CNS0095615	Golden flower (tetraploid) 3	6.167
CRA001975	CRR073297	Stem 1	20.527
	CRR073298	Stem 2	21.077
	CRR073299	Stem 3	28.816
	CRR073300	Leaf 1	28.503
	CRR073301	Leaf 2	28.690
	CRR073302	Leaf 3	18.328
	CRR073303	Juvenile bud 1	26.358
	CRR073304	Juvenile bud 2	16.635
	CRR073305	Juvenile bud 3	21.101
	CRR073306	Third green 1	6.966
	CRR073307	Third green 2	7.672
	CRR073308	Third green 3	9.595
	CRR073309	Second white 1	3.068
	CRR073310	Second white 2	3.277
	CRR073311	Second white 3	1.956
	CRR073312	Silver flowering 1	1.560
	CRR073313	Silver flowering 2	2.795
	CRR073314	Silver flowering 3	2.689
	CRR073315	Gold flowering 1	5.047
	CRR073316	Gold flowering 2	4.559
	CRR073317	Gold flowering 3	3.562
	CRR073318	Tawny withering 1	28.450
	CRR073319	Tawny withering 2	18.341
	CRR073320	Tawny withering 3	26.332