Detail information of GWHGAAZE029876


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009368314.14.15463E-58PREDICTED: hemiasterlin resistant protein 1 [Pyrus x bretschneideri]
trEMBLtr|A0A022PVX5|A0A022PVX5_ERYGU3E-57Uncharacterized protein {ECO:0000313|EMBL:EYU18400.1}
TAIR10AT5G09570.12E-29Cox19-like CHCH family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3471237434721281-
GWHAAZE00000009mRNA3471237434721281-
GWHAAZE00000009exon3472111034721281-
GWHAAZE00000009exon3471365034713700-
GWHAAZE00000009exon3471325634713339-
GWHAAZE00000009exon3471296834713143-
GWHAAZE00000009exon3471237434712472-
GWHAAZE00000009CDS3472111034721281-
GWHAAZE00000009CDS3471365034713700-
GWHAAZE00000009CDS3471325634713339-
GWHAAZE00000009CDS3471296834713143-
GWHAAZE00000009CDS3471237434712472-
Transcript Sequence

Network for GWHGAAZE029876

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0160


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06747.14CHCH1521863.70E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf334.106
SRR3591706second leaf170.169
SRR3591707mature leaf103.805
SRR3591708Shoot apex281.740
SRR3591709Stem289.827
SRR3591710White floral bud500.067
SRR3591711White flower603.994
SRR3591712Green floral bud521.604
SRR3591713Yellow flower447.349
SRP173429 SRR8316895Juvenile bud stage 237.273
SRR8316896Juvenile bud stage 414.383
SRR8316897Juvenile bud stage 204.522
SRR8316894Third green stage 160.650
SRR8316900Third green stage 565.702
SRR8316901Third green stage 529.936
SRR8316898Complete white stage 199.139
SRR8316899Complete white stage 382.777
SRR8316903Complete white stage 347.544
SRR8316902Silver flowering stage320.652
SRR8316904Silver flowering stage320.537
SRR8316905Silver flowering stage204.966
SRR8316906Gold flowering stage 747.006
SRR8316907Gold flowering stage 816.447
SRR8316908Gold flowering stage 818.938
SRP132670SRR6706286Control370.358
SRR6706287Light intensity 50%368.360
SRR6706288Light intensity 20%403.714
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1419.759
CNS0095593Slightly white alabastrum(diploid) 2486.538
CNS0095594Slightly white alabastrum(diploid) 3441.222
CNS0095595Whole white alabastrum(diploid) 2431.680
CNS0095596Whole white alabastrum(diploid) 3499.321
CNS0095597Whole white alabastrum(diploid) 4375.836
CNS0095598Silvery flower (diploied) 1185.164
CNS0095599Silvery flower (diploied) 2248.406
CNS0095600Silvery flower (diploied) 3401.636
CNS0095601Golden flower (diploid) 1209.686
CNS0095602Golden flower (diploid) 2280.870
CNS0095603Golden flower (diploid) 3287.722
CNS0095604Slightly white alabastrum(tetraploid) 1446.522
CNS0095605Slightly white alabastrum(tetraploid) 2433.020
CNS0095606Slightly white alabastrum(tetraploid) 3293.909
CNS0095607Whole white alabastrum(tetraploid) 1414.537
CNS0095608Whole white alabastrum(tetraploid) 2404.215
CNS0095609Whole white alabastrum(tetraploid) 3380.403
CNS0095610Silvery flower (tetraploid) 1458.819
CNS0095611Silvery flower (tetraploid) 2354.531
CNS0095612Silvery flower (tetraploid) 3517.722
CNS0095613Golden flower (tetraploid) 1446.974
CNS0095614Golden flower (tetraploid) 2329.364
CNS0095615Golden flower (tetraploid) 3402.427
CRA001975CRR073297Stem 1346.305
CRR073298Stem 2368.361
CRR073299Stem 3467.746
CRR073300Leaf 1468.978
CRR073301Leaf 2502.187
CRR073302Leaf 3685.132
CRR073303Juvenile bud 1619.685
CRR073304Juvenile bud 2670.151
CRR073305Juvenile bud 3441.774
CRR073306Third green 1741.483
CRR073307Third green 2813.079
CRR073308Third green 3658.465
CRR073309Second white 11022.559
CRR073310Second white 2797.251
CRR073311Second white 3470.668
CRR073312Silver flowering 1525.433
CRR073313Silver flowering 2734.885
CRR073314Silver flowering 3505.898
CRR073315Gold flowering 1263.981
CRR073316Gold flowering 2243.903
CRR073317Gold flowering 3220.293
CRR073318Tawny withering 1347.042
CRR073319Tawny withering 2322.419
CRR073320Tawny withering 3351.059