Detail information of GWHGAAZE029978


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011088302.10PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic [Sesamum indicum]
COGYP_421156.12E-169N-acetyl-gamma-glutamyl-phosphate reductase
Swissprottr|Q6AV34|ARGC_ORYSJ0Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic (Precursor)
trEMBLtr|A0A022RDB6|A0A022RDB6_ERYGU0N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|RuleBase:RU004038}
TAIR10AT2G19940.24E-171oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3614897936155619-
GWHAAZE00000009mRNA3614897936155619-
GWHAAZE00000009exon3614897936149086-
GWHAAZE00000009exon3614919636149324-
GWHAAZE00000009exon3614965636149745-
GWHAAZE00000009exon3614982336149902-
GWHAAZE00000009exon3615073336150813-
GWHAAZE00000009exon3615090136150961-
GWHAAZE00000009exon3615129936151418-
GWHAAZE00000009exon3615165636151727-
GWHAAZE00000009exon3615181736151867-
GWHAAZE00000009exon3615204136152127-
GWHAAZE00000009exon3615254136152648-
GWHAAZE00000009exon3615429436154449-
GWHAAZE00000009exon3615555736155619-
GWHAAZE00000009CDS3615555736155619-
GWHAAZE00000009CDS3615429436154449-
GWHAAZE00000009CDS3615254136152648-
GWHAAZE00000009CDS3615204136152127-
GWHAAZE00000009CDS3615181736151867-
GWHAAZE00000009CDS3615165636151727-
GWHAAZE00000009CDS3615129936151418-
GWHAAZE00000009CDS3615090136150961-
GWHAAZE00000009CDS3615073336150813-
GWHAAZE00000009CDS3614982336149902-
GWHAAZE00000009CDS3614965636149745-
GWHAAZE00000009CDS3614919636149324-
GWHAAZE00000009CDS3614897936149086-
Transcript Sequence

Network for GWHGAAZE029978

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01118.25Semialdhyde_dh601963.50E-28
PF02774.19Semialdhyde_dhC2143729.50E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00145argC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220

Gene Ontology

GO term OntologyName
GO:0008652biological_processcellular amino acid biosynthetic process
GO:0006526biological_processarginine biosynthetic process
GO:0055114biological_processoxidation-reduction process
GO:0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0046983molecular_functionprotein dimerization activity
GO:0003942molecular_functionN-acetyl-gamma-glutamyl-phosphate reductase activity
GO:0051287molecular_functionNAD binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf35.673
SRR3591706second leaf30.392
SRR3591707mature leaf29.659
SRR3591708Shoot apex39.023
SRR3591709Stem40.335
SRR3591710White floral bud33.010
SRR3591711White flower47.642
SRR3591712Green floral bud51.502
SRR3591713Yellow flower58.190
SRP173429 SRR8316895Juvenile bud stage 27.476
SRR8316896Juvenile bud stage 39.439
SRR8316897Juvenile bud stage 19.726
SRR8316894Third green stage 17.022
SRR8316900Third green stage 55.134
SRR8316901Third green stage 50.695
SRR8316898Complete white stage 10.282
SRR8316899Complete white stage 60.575
SRR8316903Complete white stage 19.682
SRR8316902Silver flowering stage10.569
SRR8316904Silver flowering stage18.067
SRR8316905Silver flowering stage6.871
SRR8316906Gold flowering stage 25.860
SRR8316907Gold flowering stage 29.518
SRR8316908Gold flowering stage 26.708
SRP132670SRR6706286Control36.283
SRR6706287Light intensity 50%38.141
SRR6706288Light intensity 20%46.714
CNP0000432CNS0095592Slightly white alabastrum(diploid) 132.660
CNS0095593Slightly white alabastrum(diploid) 233.088
CNS0095594Slightly white alabastrum(diploid) 327.110
CNS0095595Whole white alabastrum(diploid) 229.742
CNS0095596Whole white alabastrum(diploid) 329.058
CNS0095597Whole white alabastrum(diploid) 427.897
CNS0095598Silvery flower (diploied) 148.199
CNS0095599Silvery flower (diploied) 240.288
CNS0095600Silvery flower (diploied) 362.696
CNS0095601Golden flower (diploid) 139.779
CNS0095602Golden flower (diploid) 261.845
CNS0095603Golden flower (diploid) 353.899
CNS0095604Slightly white alabastrum(tetraploid) 131.725
CNS0095605Slightly white alabastrum(tetraploid) 227.580
CNS0095606Slightly white alabastrum(tetraploid) 349.119
CNS0095607Whole white alabastrum(tetraploid) 119.788
CNS0095608Whole white alabastrum(tetraploid) 216.496
CNS0095609Whole white alabastrum(tetraploid) 343.879
CNS0095610Silvery flower (tetraploid) 153.315
CNS0095611Silvery flower (tetraploid) 255.049
CNS0095612Silvery flower (tetraploid) 333.614
CNS0095613Golden flower (tetraploid) 134.801
CNS0095614Golden flower (tetraploid) 248.128
CNS0095615Golden flower (tetraploid) 327.617
CRA001975CRR073297Stem 141.767
CRR073298Stem 238.119
CRR073299Stem 334.039
CRR073300Leaf 145.931
CRR073301Leaf 238.190
CRR073302Leaf 346.822
CRR073303Juvenile bud 143.505
CRR073304Juvenile bud 238.569
CRR073305Juvenile bud 345.648
CRR073306Third green 12.467
CRR073307Third green 23.085
CRR073308Third green 34.954
CRR073309Second white 122.331
CRR073310Second white 225.549
CRR073311Second white 315.386
CRR073312Silver flowering 117.970
CRR073313Silver flowering 215.991
CRR073314Silver flowering 313.268
CRR073315Gold flowering 122.591
CRR073316Gold flowering 230.098
CRR073317Gold flowering 327.805
CRR073318Tawny withering 129.085
CRR073319Tawny withering 223.057
CRR073320Tawny withering 327.441