Detail information of GWHGAAZE029981


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006379213.15.78611E-58hypothetical protein POPTR_0009s11050g [Populus trichocarpa]
COGYP_004688377.14E-16alpha/beta hydrolase
Swissprottr|Q9SE93|PNAE_RAUSE3E-48Polyneuridine-aldehyde esterase (Precursor)
trEMBLtr|U5G0S4|U5G0S4_POPTR2E-58Uncharacterized protein {ECO:0000313|EMBL:ERP57010.1}
TAIR10AT2G23620.12E-38methyl esterase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3620058336201252-
GWHAAZE00000009mRNA3620058336201252-
GWHAAZE00000009exon3620058336200747-
GWHAAZE00000009exon3620081536201252-
GWHAAZE00000009CDS3620081536201252-
GWHAAZE00000009CDS3620058336200747-
Transcript Sequence

Network for GWHGAAZE029981

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0229


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00561.21Abhydrolase_1291323.30E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE029981.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 302004006008001000120014001600180020002200Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.767
SRR3591706second leaf45.739
SRR3591707mature leaf7.341
SRR3591708Shoot apex93.883
SRR3591709Stem82.593
SRR3591710White floral bud133.024
SRR3591711White flower407.914
SRR3591712Green floral bud14.190
SRR3591713Yellow flower49.497
SRP173429 SRR8316895Juvenile bud stage 24.872
SRR8316896Juvenile bud stage 21.262
SRR8316897Juvenile bud stage 2.132
SRR8316894Third green stage 4.347
SRR8316900Third green stage 8.403
SRR8316901Third green stage 19.228
SRR8316898Complete white stage 89.925
SRR8316899Complete white stage 18.331
SRR8316903Complete white stage 128.113
SRR8316902Silver flowering stage34.679
SRR8316904Silver flowering stage55.677
SRR8316905Silver flowering stage20.164
SRR8316906Gold flowering stage 90.024
SRR8316907Gold flowering stage 162.511
SRR8316908Gold flowering stage 38.246
SRP132670SRR6706286Control42.466
SRR6706287Light intensity 50%32.616
SRR6706288Light intensity 20%13.065
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.596
CNS0095593Slightly white alabastrum(diploid) 212.106
CNS0095594Slightly white alabastrum(diploid) 313.345
CNS0095595Whole white alabastrum(diploid) 26.543
CNS0095596Whole white alabastrum(diploid) 32.138
CNS0095597Whole white alabastrum(diploid) 413.798
CNS0095598Silvery flower (diploied) 11966.183
CNS0095599Silvery flower (diploied) 21568.227
CNS0095600Silvery flower (diploied) 3312.820
CNS0095601Golden flower (diploid) 1587.565
CNS0095602Golden flower (diploid) 2513.731
CNS0095603Golden flower (diploid) 3491.467
CNS0095604Slightly white alabastrum(tetraploid) 10.058
CNS0095605Slightly white alabastrum(tetraploid) 20.014
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.097
CNS0095608Whole white alabastrum(tetraploid) 20.055
CNS0095609Whole white alabastrum(tetraploid) 30.688
CNS0095610Silvery flower (tetraploid) 10.509
CNS0095611Silvery flower (tetraploid) 21.084
CNS0095612Silvery flower (tetraploid) 30.670
CNS0095613Golden flower (tetraploid) 12.533
CNS0095614Golden flower (tetraploid) 22.101
CNS0095615Golden flower (tetraploid) 35.467
CRA001975CRR073297Stem 142.963
CRR073298Stem 240.597
CRR073299Stem 369.527
CRR073300Leaf 13.283
CRR073301Leaf 24.436
CRR073302Leaf 34.556
CRR073303Juvenile bud 13.047
CRR073304Juvenile bud 225.443
CRR073305Juvenile bud 33.510
CRR073306Third green 131.699
CRR073307Third green 223.182
CRR073308Third green 344.170
CRR073309Second white 145.380
CRR073310Second white 239.879
CRR073311Second white 329.523
CRR073312Silver flowering 130.064
CRR073313Silver flowering 224.383
CRR073314Silver flowering 323.200
CRR073315Gold flowering 12.563
CRR073316Gold flowering 21.958
CRR073317Gold flowering 34.771
CRR073318Tawny withering 16.786
CRR073319Tawny withering 24.307
CRR073320Tawny withering 30.990