Detail information of GWHGAAZE030020


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO97074.10unnamed protein product [Coffea canephora]
Swissprottr|Q9SXA1|P4KA1_ARATH0Phosphatidylinositol 4-kinase alpha 1
trEMBLtr|A0A068TMA6|A0A068TMA6_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_1 {ECO:0000313|EMBL:CDO97074.1}
TAIR10AT1G49340.20Phosphatidylinositol 3- and 4-kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3676875536796429-
GWHAAZE00000009mRNA3676875536796429-
GWHAAZE00000009exon3679555436796429-
GWHAAZE00000009exon3679492736795268-
GWHAAZE00000009exon3679468436794845-
GWHAAZE00000009exon3679441236794474-
GWHAAZE00000009exon3679329236793465-
GWHAAZE00000009exon3679295936793117-
GWHAAZE00000009exon3679250436792631-
GWHAAZE00000009exon3679201136792317-
GWHAAZE00000009exon3679164036791808-
GWHAAZE00000009exon3679129536791512-
GWHAAZE00000009exon3679076436790922-
GWHAAZE00000009exon3679045736790639-
GWHAAZE00000009exon3678939236789928-
GWHAAZE00000009exon3678892836789287-
GWHAAZE00000009exon3678687436787088-
GWHAAZE00000009exon3678151036781693-
GWHAAZE00000009exon3678121036781346-
GWHAAZE00000009exon3678093236781085-
GWHAAZE00000009exon3678011336780379-
GWHAAZE00000009exon3677960636779683-
GWHAAZE00000009exon3677943936779489-
GWHAAZE00000009exon3677908636779258-
GWHAAZE00000009exon3677871636778911-
GWHAAZE00000009exon3677005136770191-
GWHAAZE00000009exon3676975336769961-
GWHAAZE00000009exon3676910936769270-
GWHAAZE00000009exon3676875536769013-
GWHAAZE00000009CDS3679555436796429-
GWHAAZE00000009CDS3679492736795268-
GWHAAZE00000009CDS3679468436794845-
GWHAAZE00000009CDS3679441236794474-
GWHAAZE00000009CDS3679329236793465-
GWHAAZE00000009CDS3679295936793117-
GWHAAZE00000009CDS3679250436792631-
GWHAAZE00000009CDS3679201136792317-
GWHAAZE00000009CDS3679164036791808-
GWHAAZE00000009CDS3679129536791512-
GWHAAZE00000009CDS3679076436790922-
GWHAAZE00000009CDS3679045736790639-
GWHAAZE00000009CDS3678939236789928-
GWHAAZE00000009CDS3678892836789287-
GWHAAZE00000009CDS3678687436787088-
GWHAAZE00000009CDS3678151036781693-
GWHAAZE00000009CDS3678121036781346-
GWHAAZE00000009CDS3678093236781085-
GWHAAZE00000009CDS3678011336780379-
GWHAAZE00000009CDS3677960636779683-
GWHAAZE00000009CDS3677943936779489-
GWHAAZE00000009CDS3677908636779258-
GWHAAZE00000009CDS3677871636778911-
GWHAAZE00000009CDS3677005136770191-
GWHAAZE00000009CDS3676975336769961-
GWHAAZE00000009CDS3676910936769270-
GWHAAZE00000009CDS3676875536769013-
Transcript Sequence

Network for GWHGAAZE030020

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00613.21PI3Ka150216418.30E-22
PF00454.28PI3_PI4_kinase176019673.40E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00888PI4KA Metabolic pathways map01100
Inositol phosphate metabolismmap00562
MAPK signaling pathway - yeastmap04011
Phosphatidylinositol signaling systemmap04070

Gene Ontology

GO term OntologyName
GO:0016301molecular_functionkinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf26.820
SRR3591706second leaf19.420
SRR3591707mature leaf14.934
SRR3591708Shoot apex19.915
SRR3591709Stem19.670
SRR3591710White floral bud30.894
SRR3591711White flower22.037
SRR3591712Green floral bud31.483
SRR3591713Yellow flower18.443
SRP173429 SRR8316895Juvenile bud stage 11.061
SRR8316896Juvenile bud stage 16.603
SRR8316897Juvenile bud stage 7.795
SRR8316894Third green stage 8.352
SRR8316900Third green stage 22.529
SRR8316901Third green stage 20.382
SRR8316898Complete white stage 4.661
SRR8316899Complete white stage 15.614
SRR8316903Complete white stage 11.979
SRR8316902Silver flowering stage5.878
SRR8316904Silver flowering stage10.095
SRR8316905Silver flowering stage4.124
SRR8316906Gold flowering stage 15.702
SRR8316907Gold flowering stage 12.030
SRR8316908Gold flowering stage 13.908
SRP132670SRR6706286Control22.464
SRR6706287Light intensity 50%24.672
SRR6706288Light intensity 20%25.827
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.022
CNS0095593Slightly white alabastrum(diploid) 28.783
CNS0095594Slightly white alabastrum(diploid) 38.199
CNS0095595Whole white alabastrum(diploid) 213.501
CNS0095596Whole white alabastrum(diploid) 312.050
CNS0095597Whole white alabastrum(diploid) 414.632
CNS0095598Silvery flower (diploied) 110.636
CNS0095599Silvery flower (diploied) 210.252
CNS0095600Silvery flower (diploied) 319.824
CNS0095601Golden flower (diploid) 19.569
CNS0095602Golden flower (diploid) 219.805
CNS0095603Golden flower (diploid) 319.093
CNS0095604Slightly white alabastrum(tetraploid) 113.307
CNS0095605Slightly white alabastrum(tetraploid) 210.291
CNS0095606Slightly white alabastrum(tetraploid) 323.274
CNS0095607Whole white alabastrum(tetraploid) 115.509
CNS0095608Whole white alabastrum(tetraploid) 219.516
CNS0095609Whole white alabastrum(tetraploid) 323.767
CNS0095610Silvery flower (tetraploid) 118.168
CNS0095611Silvery flower (tetraploid) 218.582
CNS0095612Silvery flower (tetraploid) 320.115
CNS0095613Golden flower (tetraploid) 17.762
CNS0095614Golden flower (tetraploid) 214.642
CNS0095615Golden flower (tetraploid) 320.372
CRA001975CRR073297Stem 124.766
CRR073298Stem 222.991
CRR073299Stem 316.937
CRR073300Leaf 130.044
CRR073301Leaf 224.878
CRR073302Leaf 317.300
CRR073303Juvenile bud 120.305
CRR073304Juvenile bud 214.335
CRR073305Juvenile bud 322.159
CRR073306Third green 111.614
CRR073307Third green 28.021
CRR073308Third green 313.624
CRR073309Second white 16.960
CRR073310Second white 29.459
CRR073311Second white 313.905
CRR073312Silver flowering 115.930
CRR073313Silver flowering 215.862
CRR073314Silver flowering 313.104
CRR073315Gold flowering 18.126
CRR073316Gold flowering 210.954
CRR073317Gold flowering 37.037
CRR073318Tawny withering 115.007
CRR073319Tawny withering 213.887
CRR073320Tawny withering 313.246