Gene detail

Detail information of GWHGAAZE030101

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007042028.1	0	Fructose-bisphosphate aldolase 1 [Theobroma cacao]
COG	YP_007169191.1	9E-107	fructose-bisphosphate aldolase
Swissprot	tr\|Q944G9\|ALFC2_ARATH	0	Probable fructose-bisphosphate aldolase 2, chloroplastic (Precursor)
trEMBL	tr\|A0A061DYK6\|A0A061DYK6_THECC	0	Fructose-bisphosphate aldolase {ECO:0000256\|RuleBase:RU003994}
TAIR10	AT2G21330.1	0	fructose-bisphosphate aldolase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	38293712	38296660	+
GWHAAZE00000009	mRNA	38293712	38296660	+
GWHAAZE00000009	exon	38293712	38293879	+
GWHAAZE00000009	exon	38294377	38294646	+
GWHAAZE00000009	exon	38294959	38295068	+
GWHAAZE00000009	exon	38295299	38295389	+
GWHAAZE00000009	exon	38295684	38295938	+
GWHAAZE00000009	exon	38296382	38296660	+
GWHAAZE00000009	CDS	38293712	38293879	+
GWHAAZE00000009	CDS	38294377	38294646	+
GWHAAZE00000009	CDS	38294959	38295068	+
GWHAAZE00000009	CDS	38295299	38295389	+
GWHAAZE00000009	CDS	38295684	38295938	+
GWHAAZE00000009	CDS	38296382	38296660	+

Transcript Sequence
>GWHTAAZE030135 ATGGCTTCAGCATCACTTCTCAAGTCATCTGTTGTTCTTGACAAGTCCGAGTGGGTGAAGGGTCAGACCCTCCACCAGCCACGGGTCTCGGTGGTCAGGTGCCACCCCACCCCATCGGGTCTCACCATACGCGCATCTTCCTATGCCGATGAGCTCGTCAAGACAGCAAAAACAGTAGCATCGCCAGGGCGTGGAATTTTGGCCATGGACGAGTCCAACGCAACTTGCGGGAAGCGGTTGGCATCAATAGGGCTAGAGAACACAGAGGCTAACCGGCAAGCCTACCGGACTCTGCTGGTATCAGCACCTGGGCTTGGCGAATACATATCTGGTGCCATCCTCTTTGAGGAGACTCTTTACCAATCCACTGTTGATGGCAAAAAGATAGTTGATATCCTGGTTGAGCAAAAAATTGTCCCTGGTATCAAAGTTGACAAGGGTTTGGTACCCCTAGCTGGTTCAAATAATGAGTCATGGTGCCAAGGTCTCGATGGCCTTGCTTCTCGCTCTGCAGCTTACTACCAACAGGGAGCTCGCTTCGCCAAATGGCGTACCGTAGTGAGCATCCCCAATGGTCCATCCGCCTTGGCCGTCAAAGAAGCCGCCTGGGGCCTCGCTCGCTATGCTGCCATCTCTCAAGATAATGGATTGGTACCAATAGTTGAGCCAGAAATCTTGCTAGATGGAGAGCATGGTATAGACAGGACATTTGAAGTGGCCCAAAAGGTATGGGCAGAGGTGTTCTTTTACTTGGCAGAGAACAATGTGATGTTTGAAGGGATTCTGCTAAAGCCAAGCATGGTCACCCCTGGTGCTGAATGCAAAGAAAGGGCCACCCCACAAGAAGTTGCTGATTACACACTCAAACTCCTCAAACGCCGTATTCCCCCCGCCTTTTTGTCAGGTGGGCAATCTGAAGTTGAAGCAACCCTGAACTTGAACGCAATGAACCAAGCTCCCAACCCATGGCATGTGTCGTTCTCATACGCCAGAGCCCTCCAAAACACGTGCTTGAAGACGTGGGGAGGAGTCCCCGAGAACGTGAAGGCTGCTCAAGAGACATTGCTCATCCGGGCCAAGGCCAACTCTCTTGCTCAACTAGGAAAGTACACGGGCGAGGGAGAATCAGAGGAAGCTAAAAAGGGAATGTTTGTTAAGGGCTACGTGTACTAA

Network for GWHGAAZE030101

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00274.20	Glycolytic	51	390	1.60E-150

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01623	ALDO	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Biosynthesis of amino acids	map01230
		Glycolysis / Gluconeogenesis	map00010
		Pentose phosphate pathway	map00030
		Fructose and mannose metabolism	map00051
		Carbon fixation in photosynthetic organisms	map00710
		Methane metabolism	map00680
		HIF-1 signaling pathway	map04066

Gene Ontology

GO term	Ontology	Name
GO:0006096	biological_process	glycolytic process
GO:0003824	molecular_function	catalytic activity
GO:0004332	molecular_function	fructose-bisphosphate aldolase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	164.288
	SRR3591706	second leaf	1579.943
	SRR3591707	mature leaf	2200.876
	SRR3591708	Shoot apex	509.070
	SRR3591709	Stem	116.741
	SRR3591710	White floral bud	14.442
	SRR3591711	White flower	44.142
	SRR3591712	Green floral bud	12.765
	SRR3591713	Yellow flower	3.323
SRP173429	SRR8316895	Juvenile bud stage	189.824
	SRR8316896	Juvenile bud stage	129.797
	SRR8316897	Juvenile bud stage	112.382
	SRR8316894	Third green stage	43.937
	SRR8316900	Third green stage	63.370
	SRR8316901	Third green stage	60.867
	SRR8316898	Complete white stage	5.241
	SRR8316899	Complete white stage	22.567
	SRR8316903	Complete white stage	21.734
	SRR8316902	Silver flowering stage	6.534
	SRR8316904	Silver flowering stage	5.104
	SRR8316905	Silver flowering stage	3.377
	SRR8316906	Gold flowering stage	11.831
	SRR8316907	Gold flowering stage	13.093
	SRR8316908	Gold flowering stage	10.245
SRP132670	SRR6706286	Control	83.105
	SRR6706287	Light intensity 50%	59.523
	SRR6706288	Light intensity 20%	61.640
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	71.364
	CNS0095593	Slightly white alabastrum(diploid) 2	49.003
	CNS0095594	Slightly white alabastrum(diploid) 3	54.802
	CNS0095595	Whole white alabastrum(diploid) 2	42.221
	CNS0095596	Whole white alabastrum(diploid) 3	21.461
	CNS0095597	Whole white alabastrum(diploid) 4	27.077
	CNS0095598	Silvery flower (diploied) 1	254.307
	CNS0095599	Silvery flower (diploied) 2	272.575
	CNS0095600	Silvery flower (diploied) 3	51.677
	CNS0095601	Golden flower (diploid) 1	226.658
	CNS0095602	Golden flower (diploid) 2	105.695
	CNS0095603	Golden flower (diploid) 3	104.543
	CNS0095604	Slightly white alabastrum(tetraploid) 1	109.584
	CNS0095605	Slightly white alabastrum(tetraploid) 2	118.331
	CNS0095606	Slightly white alabastrum(tetraploid) 3	180.100
	CNS0095607	Whole white alabastrum(tetraploid) 1	52.894
	CNS0095608	Whole white alabastrum(tetraploid) 2	24.782
	CNS0095609	Whole white alabastrum(tetraploid) 3	99.797
	CNS0095610	Silvery flower (tetraploid) 1	8.857
	CNS0095611	Silvery flower (tetraploid) 2	37.568
	CNS0095612	Silvery flower (tetraploid) 3	11.956
	CNS0095613	Golden flower (tetraploid) 1	8.632
	CNS0095614	Golden flower (tetraploid) 2	7.820
	CNS0095615	Golden flower (tetraploid) 3	5.031
CRA001975	CRR073297	Stem 1	313.861
	CRR073298	Stem 2	246.681
	CRR073299	Stem 3	409.686
	CRR073300	Leaf 1	38.999
	CRR073301	Leaf 2	52.512
	CRR073302	Leaf 3	35.158
	CRR073303	Juvenile bud 1	28.849
	CRR073304	Juvenile bud 2	29.641
	CRR073305	Juvenile bud 3	22.053
	CRR073306	Third green 1	13.196
	CRR073307	Third green 2	4.995
	CRR073308	Third green 3	9.516
	CRR073309	Second white 1	10.271
	CRR073310	Second white 2	3.517
	CRR073311	Second white 3	0.977
	CRR073312	Silver flowering 1	1.007
	CRR073313	Silver flowering 2	1.514
	CRR073314	Silver flowering 3	1.418
	CRR073315	Gold flowering 1	1935.582
	CRR073316	Gold flowering 2	2103.504
	CRR073317	Gold flowering 3	2054.122
	CRR073318	Tawny withering 1	99.784
	CRR073319	Tawny withering 2	128.348
	CRR073320	Tawny withering 3	90.267