Gene detail

Detail information of GWHGAAZE030106

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011088545.1	0	PREDICTED: uncharacterized protein LOC105169746 [Sesamum indicum]
Swissprot	tr\|Q04088\|POF21_ARATH	3E-41	Probable transcription factor PosF21
trEMBL	tr\|F6I181\|F6I181_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB60697.1}
TAIR10	AT4G38900.3	6E-112	Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	38340878	38343396	+
GWHAAZE00000009	mRNA	38340878	38343396	+
GWHAAZE00000009	exon	38340878	38342154	+
GWHAAZE00000009	exon	38342222	38342354	+
GWHAAZE00000009	exon	38342446	38342530	+
GWHAAZE00000009	exon	38343335	38343396	+
GWHAAZE00000009	CDS	38340878	38342154	+
GWHAAZE00000009	CDS	38342222	38342354	+
GWHAAZE00000009	CDS	38342446	38342530	+
GWHAAZE00000009	CDS	38343335	38343396	+

Transcript Sequence
>GWHTAAZE030140 ATGGGGGGTGATAGTGAAGAAGGTAATATTGATATGATGCCAAGGCTTCAATCTTCCTTTGGAATTTCATCCAATAAACAACCCATTTCGATCAATCAACTAGATATACCACAGTTCAATACTTCACAAATTCGTGGTCAGATGAGACAATTGTCCCCAAATTTTAGTGTTGAGAGTAGTAAGAGAGTGGGTATACCCCCTTCTCATCCACAAATCCCTCCTATATCTCCATATTCCCAGATCCCTGTAACCCGGACTTCAAATCAGCAAATAGGTTCACAGAATTTTACCCCAGGGCCGTCCCATTCGCGTTCTTTATCACAGCCCTCATTTTTCTCGCTTGATTCCTTGCCCCCTTTGAGCCCATCCCCATATAGGGATTCCCCATCAGGTTCAATTTCTGATCAGGTATCAGTAGATGTGTCAATGGAGGATAGAGATGGGAATTCACACTCGTTATTGCCGCCATCGCCTTTCACTAGGGGTAATTCTTCACGGCTGGGGGAGAGTCTTCCTCCTCGTAAAGCACACCGGCGTTCTAACAGTGACATTCCCTTTGGGTTTTCTACTATAATGCAATCTTCACCGCCACTTATCCCACTAAGGGGTTCAGGTGCCTTGGACCGATCAGCTTCAGCTAGGGGTAGTTCAGGTCAAAAGCCAATTCAGTTGGTTAAACGGGAATCGAGTTGGGATAAAGGCGGGGAGAGCAATGCAGAGGGAATGGGGGAGAGGAAATCTGAAGGGGAGGTTGTCGATGACCTTTTCTCTGCTTATATGAATTTGGACAGCTTTGATACTTTGAACTCTTCCGGGACTGATGATAAGCAGGGTACTGAAAATCGTGAAGATTTAGATAGTAGAGCCAGTGGTACAAAGGCAAATGGCGGTGATAGTAGTGATAATGAAGCATCGAGCAGTGTTAATGAAAGTGGGAACAGTATGCAAACACCAGGAATCTCATCTACAGCTGAGAAAAGAGAAGGGATCAAAAGGAATGCTTGTGGAGATATTGCTCCAACGAACCGGCACTACAGAAGTGTCTCTATGGATAGTTTTATGGGAAGGATGAACTTCGGTGATGAGTCACCAAAACTGCCTCCTTCCCCTGGAGCACGACCAGGTCAACTCTCACCGACCAACTCAATTGATGGGAATTCGAATGCCTTCAGTTTGGACTTTGGGAATGGTGAGTTTAGTGGGGCCGAGCTTAAGAAGATTATGGCAAATGAGAAACTTGCGGAGATAGCACTAAGTGACCCCAAGCGAGCCAAAAGGATTTTGGCCAATCGTCAATCAGCTGCTCGTTCTAAAGAGCGGAAGATGCGTTATATTGCGGAGTTGGAGCACAAGGTTCAAACTTTGCAGACAGAAGCAACTACATTGTCTGCCCAGCTTACACTATTGCAGAGAGATTCTGCGGGGATCACAAGTCAGAATAACGAGTTAAAGTTTCGTCTGCAAGCAATGGAACAACAGGCACAGCTGCGAGATGGCATTAAAATGTTCAAGCAGAATTGCTTTTCACTCGTAGTCACTGAGCAGGGTCTAACCTGA

Network for GWHGAAZE030106

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0167

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00170.22	bZIP_1	422	480	2.80E-09

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	130.848
	SRR3591706	second leaf	29.037
	SRR3591707	mature leaf	35.694
	SRR3591708	Shoot apex	45.811
	SRR3591709	Stem	71.192
	SRR3591710	White floral bud	54.839
	SRR3591711	White flower	75.977
	SRR3591712	Green floral bud	35.561
	SRR3591713	Yellow flower	98.705
SRP173429	SRR8316895	Juvenile bud stage	76.344
	SRR8316896	Juvenile bud stage	94.736
	SRR8316897	Juvenile bud stage	67.325
	SRR8316894	Third green stage	14.098
	SRR8316900	Third green stage	40.841
	SRR8316901	Third green stage	58.756
	SRR8316898	Complete white stage	16.546
	SRR8316899	Complete white stage	92.891
	SRR8316903	Complete white stage	31.432
	SRR8316902	Silver flowering stage	17.590
	SRR8316904	Silver flowering stage	26.684
	SRR8316905	Silver flowering stage	11.052
	SRR8316906	Gold flowering stage	45.737
	SRR8316907	Gold flowering stage	45.839
	SRR8316908	Gold flowering stage	53.896
SRP132670	SRR6706286	Control	45.213
	SRR6706287	Light intensity 50%	44.746
	SRR6706288	Light intensity 20%	44.534
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	47.262
	CNS0095593	Slightly white alabastrum(diploid) 2	54.360
	CNS0095594	Slightly white alabastrum(diploid) 3	51.891
	CNS0095595	Whole white alabastrum(diploid) 2	52.016
	CNS0095596	Whole white alabastrum(diploid) 3	16.163
	CNS0095597	Whole white alabastrum(diploid) 4	37.435
	CNS0095598	Silvery flower (diploied) 1	96.412
	CNS0095599	Silvery flower (diploied) 2	118.947
	CNS0095600	Silvery flower (diploied) 3	78.823
	CNS0095601	Golden flower (diploid) 1	97.376
	CNS0095602	Golden flower (diploid) 2	127.337
	CNS0095603	Golden flower (diploid) 3	118.781
	CNS0095604	Slightly white alabastrum(tetraploid) 1	25.139
	CNS0095605	Slightly white alabastrum(tetraploid) 2	21.154
	CNS0095606	Slightly white alabastrum(tetraploid) 3	48.244
	CNS0095607	Whole white alabastrum(tetraploid) 1	17.836
	CNS0095608	Whole white alabastrum(tetraploid) 2	13.392
	CNS0095609	Whole white alabastrum(tetraploid) 3	31.258
	CNS0095610	Silvery flower (tetraploid) 1	46.462
	CNS0095611	Silvery flower (tetraploid) 2	41.184
	CNS0095612	Silvery flower (tetraploid) 3	36.622
	CNS0095613	Golden flower (tetraploid) 1	40.359
	CNS0095614	Golden flower (tetraploid) 2	50.531
	CNS0095615	Golden flower (tetraploid) 3	89.324
CRA001975	CRR073297	Stem 1	54.733
	CRR073298	Stem 2	49.782
	CRR073299	Stem 3	37.247
	CRR073300	Leaf 1	68.742
	CRR073301	Leaf 2	80.995
	CRR073302	Leaf 3	38.600
	CRR073303	Juvenile bud 1	35.219
	CRR073304	Juvenile bud 2	33.113
	CRR073305	Juvenile bud 3	45.488
	CRR073306	Third green 1	22.086
	CRR073307	Third green 2	25.240
	CRR073308	Third green 3	25.196
	CRR073309	Second white 1	11.730
	CRR073310	Second white 2	15.670
	CRR073311	Second white 3	15.589
	CRR073312	Silver flowering 1	22.669
	CRR073313	Silver flowering 2	17.886
	CRR073314	Silver flowering 3	24.011
	CRR073315	Gold flowering 1	25.283
	CRR073316	Gold flowering 2	39.224
	CRR073317	Gold flowering 3	18.392
	CRR073318	Tawny withering 1	92.647
	CRR073319	Tawny withering 2	93.277
	CRR073320	Tawny withering 3	79.927