Detail information of GWHGAAZE030110


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010246411.16.75113E-71PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Nelumbo nucifera]
Swissprottr|P33083|AX6B_SOYBN5E-17Auxin-induced protein 6B
trEMBLtr|A0A067KXE4|A0A067KXE4_JATCU7E-68Uncharacterized protein {ECO:0000313|EMBL:KDP36945.1}
TAIR10AT1G75590.12E-42SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3840799338408451+
GWHAAZE00000009mRNA3840799338408451+
GWHAAZE00000009exon3840799338408451+
GWHAAZE00000009CDS3840799338408451+
Transcript Sequence

Network for GWHGAAZE030110

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible161054.10E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.478
SRR3591706second leaf1.622
SRR3591707mature leaf1.078
SRR3591708Shoot apex10.060
SRR3591709Stem7.651
SRR3591710White floral bud7.744
SRR3591711White flower2.335
SRR3591712Green floral bud3.798
SRR3591713Yellow flower0.235
SRP173429 SRR8316895Juvenile bud stage 0.519
SRR8316896Juvenile bud stage 0.585
SRR8316897Juvenile bud stage 0.206
SRR8316894Third green stage 1.169
SRR8316900Third green stage 5.761
SRR8316901Third green stage 3.604
SRR8316898Complete white stage 2.687
SRR8316899Complete white stage 10.050
SRR8316903Complete white stage 2.600
SRR8316902Silver flowering stage0.873
SRR8316904Silver flowering stage0.924
SRR8316905Silver flowering stage0.051
SRR8316906Gold flowering stage 0.602
SRR8316907Gold flowering stage 0.230
SRR8316908Gold flowering stage 1.426
SRP132670SRR6706286Control9.870
SRR6706287Light intensity 50%11.439
SRR6706288Light intensity 20%8.602
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.209
CNS0095593Slightly white alabastrum(diploid) 25.136
CNS0095594Slightly white alabastrum(diploid) 32.255
CNS0095595Whole white alabastrum(diploid) 22.630
CNS0095596Whole white alabastrum(diploid) 33.324
CNS0095597Whole white alabastrum(diploid) 41.509
CNS0095598Silvery flower (diploied) 12.047
CNS0095599Silvery flower (diploied) 20.101
CNS0095600Silvery flower (diploied) 31.142
CNS0095601Golden flower (diploid) 12.498
CNS0095602Golden flower (diploid) 20.849
CNS0095603Golden flower (diploid) 31.079
CNS0095604Slightly white alabastrum(tetraploid) 14.077
CNS0095605Slightly white alabastrum(tetraploid) 24.088
CNS0095606Slightly white alabastrum(tetraploid) 38.487
CNS0095607Whole white alabastrum(tetraploid) 13.076
CNS0095608Whole white alabastrum(tetraploid) 22.226
CNS0095609Whole white alabastrum(tetraploid) 33.906
CNS0095610Silvery flower (tetraploid) 11.055
CNS0095611Silvery flower (tetraploid) 21.106
CNS0095612Silvery flower (tetraploid) 32.542
CNS0095613Golden flower (tetraploid) 10.071
CNS0095614Golden flower (tetraploid) 20.773
CNS0095615Golden flower (tetraploid) 30.332
CRA001975CRR073297Stem 16.110
CRR073298Stem 27.225
CRR073299Stem 310.537
CRR073300Leaf 19.239
CRR073301Leaf 29.645
CRR073302Leaf 311.376
CRR073303Juvenile bud 16.155
CRR073304Juvenile bud 26.285
CRR073305Juvenile bud 37.353
CRR073306Third green 14.397
CRR073307Third green 25.767
CRR073308Third green 34.561
CRR073309Second white 10.000
CRR073310Second white 20.055
CRR073311Second white 30.375
CRR073312Silver flowering 10.075
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.744
CRR073315Gold flowering 14.896
CRR073316Gold flowering 21.585
CRR073317Gold flowering 31.645
CRR073318Tawny withering 113.274
CRR073319Tawny withering 21.307
CRR073320Tawny withering 311.765