Detail information of GWHGAAZE030115


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002271660.25.45742E-80PREDICTED: uncharacterized protein LOC100252964 [Vitis vinifera]
Swissprottr|P33080|AX10A_SOYBN1E-32Auxin-induced protein X10A
trEMBLtr|A0A061E6C6|A0A061E6C6_THECC6E-73SAUR-like auxin-responsive protein family {ECO:0000313|EMBL:EOX97813.1}
TAIR10AT4G38840.11E-30SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3848741038489481-
GWHAAZE00000009mRNA3848741038489481-
GWHAAZE00000009exon3848918538489481-
GWHAAZE00000009exon3848741038487721-
GWHAAZE00000009CDS3848918538489481-
GWHAAZE00000009CDS3848741038487721-
Transcript Sequence

Network for GWHGAAZE030115

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible26931.00E-21
PF02519.15Auxin_inducible1322006.30E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.104
SRR3591706second leaf0.888
SRR3591707mature leaf1.912
SRR3591708Shoot apex0.428
SRR3591709Stem0.570
SRR3591710White floral bud2.282
SRR3591711White flower0.550
SRR3591712Green floral bud2.706
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.004
SRR8316896Juvenile bud stage 1.278
SRR8316897Juvenile bud stage 0.439
SRR8316894Third green stage 0.317
SRR8316900Third green stage 2.267
SRR8316901Third green stage 1.957
SRR8316898Complete white stage 1.499
SRR8316899Complete white stage 1.865
SRR8316903Complete white stage 1.522
SRR8316902Silver flowering stage0.533
SRR8316904Silver flowering stage0.592
SRR8316905Silver flowering stage0.056
SRR8316906Gold flowering stage 0.753
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 1.261
SRP132670SRR6706286Control0.321
SRR6706287Light intensity 50%0.181
SRR6706288Light intensity 20%0.676
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.271
CNS0095593Slightly white alabastrum(diploid) 21.219
CNS0095594Slightly white alabastrum(diploid) 30.967
CNS0095595Whole white alabastrum(diploid) 22.016
CNS0095596Whole white alabastrum(diploid) 32.594
CNS0095597Whole white alabastrum(diploid) 43.162
CNS0095598Silvery flower (diploied) 10.713
CNS0095599Silvery flower (diploied) 20.873
CNS0095600Silvery flower (diploied) 30.461
CNS0095601Golden flower (diploid) 10.339
CNS0095602Golden flower (diploid) 20.202
CNS0095603Golden flower (diploid) 30.277
CNS0095604Slightly white alabastrum(tetraploid) 14.895
CNS0095605Slightly white alabastrum(tetraploid) 23.066
CNS0095606Slightly white alabastrum(tetraploid) 34.140
CNS0095607Whole white alabastrum(tetraploid) 14.034
CNS0095608Whole white alabastrum(tetraploid) 24.100
CNS0095609Whole white alabastrum(tetraploid) 36.225
CNS0095610Silvery flower (tetraploid) 10.424
CNS0095611Silvery flower (tetraploid) 21.076
CNS0095612Silvery flower (tetraploid) 31.374
CNS0095613Golden flower (tetraploid) 10.138
CNS0095614Golden flower (tetraploid) 20.367
CNS0095615Golden flower (tetraploid) 31.344
CRA001975CRR073297Stem 10.209
CRR073298Stem 20.138
CRR073299Stem 30.422
CRR073300Leaf 10.416
CRR073301Leaf 20.262
CRR073302Leaf 30.080
CRR073303Juvenile bud 10.469
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.528
CRR073306Third green 10.393
CRR073307Third green 20.406
CRR073308Third green 30.234
CRR073309Second white 10.000
CRR073310Second white 20.035
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.003
CRR073315Gold flowering 10.474
CRR073316Gold flowering 20.117
CRR073317Gold flowering 30.325
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000