Detail information of GWHGAAZE030122


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010246411.12.1634E-70PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Nelumbo nucifera]
Swissprottr|P33083|AX6B_SOYBN2E-17Auxin-induced protein 6B
trEMBLtr|A0A067KXE4|A0A067KXE4_JATCU3E-68Uncharacterized protein {ECO:0000313|EMBL:KDP36945.1}
TAIR10AT1G75590.11E-42SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3855832838558786+
GWHAAZE00000009mRNA3855832838558786+
GWHAAZE00000009exon3855832838558786+
GWHAAZE00000009CDS3855832838558786+
Transcript Sequence

Network for GWHGAAZE030122

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible161053.30E-29
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.863
SRR3591706second leaf2.439
SRR3591707mature leaf0.660
SRR3591708Shoot apex10.834
SRR3591709Stem7.678
SRR3591710White floral bud6.901
SRR3591711White flower1.757
SRR3591712Green floral bud4.321
SRR3591713Yellow flower0.190
SRP173429 SRR8316895Juvenile bud stage 0.421
SRR8316896Juvenile bud stage 1.203
SRR8316897Juvenile bud stage 0.273
SRR8316894Third green stage 1.477
SRR8316900Third green stage 6.088
SRR8316901Third green stage 4.609
SRR8316898Complete white stage 6.056
SRR8316899Complete white stage 10.357
SRR8316903Complete white stage 6.603
SRR8316902Silver flowering stage0.880
SRR8316904Silver flowering stage0.694
SRR8316905Silver flowering stage0.063
SRR8316906Gold flowering stage 0.296
SRR8316907Gold flowering stage 1.934
SRR8316908Gold flowering stage 3.136
SRP132670SRR6706286Control6.568
SRR6706287Light intensity 50%9.914
SRR6706288Light intensity 20%9.437
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.162
CNS0095593Slightly white alabastrum(diploid) 24.570
CNS0095594Slightly white alabastrum(diploid) 32.372
CNS0095595Whole white alabastrum(diploid) 23.206
CNS0095596Whole white alabastrum(diploid) 32.647
CNS0095597Whole white alabastrum(diploid) 42.784
CNS0095598Silvery flower (diploied) 11.849
CNS0095599Silvery flower (diploied) 20.503
CNS0095600Silvery flower (diploied) 32.177
CNS0095601Golden flower (diploid) 11.668
CNS0095602Golden flower (diploid) 22.026
CNS0095603Golden flower (diploid) 31.707
CNS0095604Slightly white alabastrum(tetraploid) 16.516
CNS0095605Slightly white alabastrum(tetraploid) 24.851
CNS0095606Slightly white alabastrum(tetraploid) 311.604
CNS0095607Whole white alabastrum(tetraploid) 14.077
CNS0095608Whole white alabastrum(tetraploid) 23.926
CNS0095609Whole white alabastrum(tetraploid) 35.248
CNS0095610Silvery flower (tetraploid) 12.386
CNS0095611Silvery flower (tetraploid) 22.181
CNS0095612Silvery flower (tetraploid) 33.409
CNS0095613Golden flower (tetraploid) 10.170
CNS0095614Golden flower (tetraploid) 21.257
CNS0095615Golden flower (tetraploid) 30.540
CRA001975CRR073297Stem 14.873
CRR073298Stem 25.839
CRR073299Stem 35.846
CRR073300Leaf 19.315
CRR073301Leaf 29.463
CRR073302Leaf 311.023
CRR073303Juvenile bud 14.569
CRR073304Juvenile bud 27.333
CRR073305Juvenile bud 37.093
CRR073306Third green 16.048
CRR073307Third green 27.856
CRR073308Third green 38.290
CRR073309Second white 10.647
CRR073310Second white 20.608
CRR073311Second white 30.746
CRR073312Silver flowering 10.073
CRR073313Silver flowering 20.275
CRR073314Silver flowering 30.956
CRR073315Gold flowering 13.618
CRR073316Gold flowering 22.751
CRR073317Gold flowering 33.884
CRR073318Tawny withering 118.573
CRR073319Tawny withering 21.468
CRR073320Tawny withering 315.593