Detail information of GWHGAAZE030132


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006423537.13.2804E-42hypothetical protein CICLE_v10029871mg [Citrus clementina]
Swissprottr|P33081|AX15A_SOYBN2E-32Auxin-induced protein 15A
trEMBLtr|V4S8K9|V4S8K9_9ROSI1E-42Uncharacterized protein {ECO:0000313|EMBL:ESR36777.1}
TAIR10AT4G38840.12E-21SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3865973938660023+
GWHAAZE00000009mRNA3865973938660023+
GWHAAZE00000009exon3865973938660023+
GWHAAZE00000009CDS3865973938660023+
Transcript Sequence

Network for GWHGAAZE030132

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible13893.30E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.717
SRR3591706second leaf8.662
SRR3591707mature leaf6.014
SRR3591708Shoot apex2.127
SRR3591709Stem9.253
SRR3591710White floral bud6.269
SRR3591711White flower2.130
SRR3591712Green floral bud3.843
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.369
SRR8316896Juvenile bud stage 1.819
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 1.600
SRR8316901Third green stage 1.564
SRR8316898Complete white stage 3.264
SRR8316899Complete white stage 2.093
SRR8316903Complete white stage 7.389
SRR8316902Silver flowering stage2.615
SRR8316904Silver flowering stage3.010
SRR8316905Silver flowering stage1.811
SRR8316906Gold flowering stage 1.739
SRR8316907Gold flowering stage 1.564
SRR8316908Gold flowering stage 1.077
SRP132670SRR6706286Control1.488
SRR6706287Light intensity 50%1.938
SRR6706288Light intensity 20%2.596
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.435
CNS0095593Slightly white alabastrum(diploid) 21.728
CNS0095594Slightly white alabastrum(diploid) 32.173
CNS0095595Whole white alabastrum(diploid) 23.454
CNS0095596Whole white alabastrum(diploid) 36.505
CNS0095597Whole white alabastrum(diploid) 42.795
CNS0095598Silvery flower (diploied) 10.237
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.273
CNS0095601Golden flower (diploid) 10.481
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.558
CNS0095604Slightly white alabastrum(tetraploid) 11.475
CNS0095605Slightly white alabastrum(tetraploid) 22.017
CNS0095606Slightly white alabastrum(tetraploid) 33.766
CNS0095607Whole white alabastrum(tetraploid) 12.022
CNS0095608Whole white alabastrum(tetraploid) 20.668
CNS0095609Whole white alabastrum(tetraploid) 32.417
CNS0095610Silvery flower (tetraploid) 10.692
CNS0095611Silvery flower (tetraploid) 20.652
CNS0095612Silvery flower (tetraploid) 30.267
CNS0095613Golden flower (tetraploid) 10.147
CNS0095614Golden flower (tetraploid) 20.267
CNS0095615Golden flower (tetraploid) 30.600
CRA001975CRR073297Stem 10.698
CRR073298Stem 21.164
CRR073299Stem 30.456
CRR073300Leaf 11.239
CRR073301Leaf 20.322
CRR073302Leaf 31.756
CRR073303Juvenile bud 11.940
CRR073304Juvenile bud 20.644
CRR073305Juvenile bud 32.439
CRR073306Third green 115.025
CRR073307Third green 221.267
CRR073308Third green 313.565
CRR073309Second white 13.061
CRR073310Second white 28.501
CRR073311Second white 31.873
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 31.492
CRR073315Gold flowering 10.062
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.318
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000