Detail information of GWHGAAZE030145


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002276058.21.62791E-42PREDICTED: auxin-induced protein X15 [Vitis vinifera]
Swissprottr|P33080|AX10A_SOYBN7E-30Auxin-induced protein X10A
trEMBLtr|A5B5U2|A5B5U2_VITVI6E-43Putative uncharacterized protein {ECO:0000313|EMBL:CAN65270.1}
TAIR10AT4G34770.14E-27SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3873923538739522-
GWHAAZE00000009mRNA3873923538739522-
GWHAAZE00000009exon3873923538739522-
GWHAAZE00000009CDS3873923538739522-
Transcript Sequence

Network for GWHGAAZE030145

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible21922.50E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.404
SRR3591706second leaf0.261
SRR3591707mature leaf0.060
SRR3591708Shoot apex0.143
SRR3591709Stem1.254
SRR3591710White floral bud3.192
SRR3591711White flower3.928
SRR3591712Green floral bud0.389
SRR3591713Yellow flower0.200
SRP173429 SRR8316895Juvenile bud stage 0.043
SRR8316896Juvenile bud stage 0.092
SRR8316897Juvenile bud stage 0.048
SRR8316894Third green stage 0.638
SRR8316900Third green stage 1.599
SRR8316901Third green stage 0.236
SRR8316898Complete white stage 5.400
SRR8316899Complete white stage 3.066
SRR8316903Complete white stage 8.624
SRR8316902Silver flowering stage11.584
SRR8316904Silver flowering stage8.911
SRR8316905Silver flowering stage5.868
SRR8316906Gold flowering stage 6.545
SRR8316907Gold flowering stage 3.219
SRR8316908Gold flowering stage 4.328
SRP132670SRR6706286Control0.045
SRR6706287Light intensity 50%0.166
SRR6706288Light intensity 20%0.154
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.207
CNS0095593Slightly white alabastrum(diploid) 20.100
CNS0095594Slightly white alabastrum(diploid) 30.212
CNS0095595Whole white alabastrum(diploid) 20.899
CNS0095596Whole white alabastrum(diploid) 30.095
CNS0095597Whole white alabastrum(diploid) 40.294
CNS0095598Silvery flower (diploied) 15.239
CNS0095599Silvery flower (diploied) 21.901
CNS0095600Silvery flower (diploied) 33.475
CNS0095601Golden flower (diploid) 10.100
CNS0095602Golden flower (diploid) 20.324
CNS0095603Golden flower (diploid) 31.139
CNS0095604Slightly white alabastrum(tetraploid) 10.430
CNS0095605Slightly white alabastrum(tetraploid) 21.138
CNS0095606Slightly white alabastrum(tetraploid) 31.786
CNS0095607Whole white alabastrum(tetraploid) 11.440
CNS0095608Whole white alabastrum(tetraploid) 21.941
CNS0095609Whole white alabastrum(tetraploid) 31.046
CNS0095610Silvery flower (tetraploid) 12.058
CNS0095611Silvery flower (tetraploid) 23.283
CNS0095612Silvery flower (tetraploid) 35.918
CNS0095613Golden flower (tetraploid) 11.180
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 31.080
CRA001975CRR073297Stem 10.137
CRR073298Stem 20.083
CRR073299Stem 30.143
CRR073300Leaf 11.043
CRR073301Leaf 20.479
CRR073302Leaf 30.800
CRR073303Juvenile bud 12.013
CRR073304Juvenile bud 20.843
CRR073305Juvenile bud 31.331
CRR073306Third green 114.081
CRR073307Third green 226.701
CRR073308Third green 315.934
CRR073309Second white 13.096
CRR073310Second white 27.024
CRR073311Second white 30.371
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.240
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.121
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000