Detail information of GWHGAAZE030146


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002312994.18.87775E-41auxin-responsive family protein [Populus trichocarpa]
Swissprottr|P33081|AX15A_SOYBN1E-31Auxin-induced protein 15A
trEMBLtr|B9HRD2|B9HRD2_POPTR3E-41Auxin-responsive family protein {ECO:0000313|EMBL:EEE86949.1}
TAIR10AT4G38840.18E-30SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3874029538740807+
GWHAAZE00000009mRNA3874029538740807+
GWHAAZE00000009exon3874029538740807+
GWHAAZE00000009CDS3874029538740807+
Transcript Sequence

Network for GWHGAAZE030146

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0161


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible891662.00E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.792
SRR3591706second leaf0.477
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.068
SRR3591709Stem0.477
SRR3591710White floral bud1.399
SRR3591711White flower0.289
SRR3591712Green floral bud1.951
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.465
SRR8316896Juvenile bud stage 2.515
SRR8316897Juvenile bud stage 1.494
SRR8316894Third green stage 1.329
SRR8316900Third green stage 7.783
SRR8316901Third green stage 9.475
SRR8316898Complete white stage 4.880
SRR8316899Complete white stage 9.408
SRR8316903Complete white stage 12.210
SRR8316902Silver flowering stage4.039
SRR8316904Silver flowering stage4.521
SRR8316905Silver flowering stage2.997
SRR8316906Gold flowering stage 5.289
SRR8316907Gold flowering stage 3.118
SRR8316908Gold flowering stage 2.231
SRP132670SRR6706286Control2.524
SRR6706287Light intensity 50%3.538
SRR6706288Light intensity 20%3.597
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.983
CNS0095593Slightly white alabastrum(diploid) 25.333
CNS0095594Slightly white alabastrum(diploid) 31.097
CNS0095595Whole white alabastrum(diploid) 27.067
CNS0095596Whole white alabastrum(diploid) 36.050
CNS0095597Whole white alabastrum(diploid) 48.634
CNS0095598Silvery flower (diploied) 10.931
CNS0095599Silvery flower (diploied) 20.554
CNS0095600Silvery flower (diploied) 31.736
CNS0095601Golden flower (diploid) 10.463
CNS0095602Golden flower (diploid) 20.137
CNS0095603Golden flower (diploid) 30.281
CNS0095604Slightly white alabastrum(tetraploid) 16.395
CNS0095605Slightly white alabastrum(tetraploid) 24.252
CNS0095606Slightly white alabastrum(tetraploid) 35.796
CNS0095607Whole white alabastrum(tetraploid) 14.790
CNS0095608Whole white alabastrum(tetraploid) 28.533
CNS0095609Whole white alabastrum(tetraploid) 37.145
CNS0095610Silvery flower (tetraploid) 11.286
CNS0095611Silvery flower (tetraploid) 21.459
CNS0095612Silvery flower (tetraploid) 30.927
CNS0095613Golden flower (tetraploid) 10.177
CNS0095614Golden flower (tetraploid) 20.098
CNS0095615Golden flower (tetraploid) 30.681
CRA001975CRR073297Stem 11.360
CRR073298Stem 20.253
CRR073299Stem 30.892
CRR073300Leaf 11.310
CRR073301Leaf 20.721
CRR073302Leaf 31.587
CRR073303Juvenile bud 11.162
CRR073304Juvenile bud 20.849
CRR073305Juvenile bud 30.586
CRR073306Third green 12.663
CRR073307Third green 23.267
CRR073308Third green 33.588
CRR073309Second white 11.258
CRR073310Second white 20.721
CRR073311Second white 30.259
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.052
CRR073314Silver flowering 30.009
CRR073315Gold flowering 10.178
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000