Detail information of GWHGAAZE030160


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006384539.12.04281E-41hypothetical protein POPTR_0004s17250g [Populus trichocarpa]
Swissprottr|P33081|AX15A_SOYBN7E-35Auxin-induced protein 15A
trEMBLtr|U5GJ49|U5GJ49_POPTR8E-42Uncharacterized protein {ECO:0000313|EMBL:ERP62336.1}
TAIR10AT5G18080.18E-30SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3885351538853790-
GWHAAZE00000009mRNA3885351538853790-
GWHAAZE00000009exon3885351538853790-
GWHAAZE00000009CDS3885351538853790-
Transcript Sequence

Network for GWHGAAZE030160

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible19899.30E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf16.510
SRR3591706second leaf14.010
SRR3591707mature leaf4.886
SRR3591708Shoot apex6.952
SRR3591709Stem10.492
SRR3591710White floral bud7.712
SRR3591711White flower0.981
SRR3591712Green floral bud7.993
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.507
SRR8316896Juvenile bud stage 3.014
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 4.399
SRR8316900Third green stage 9.774
SRR8316901Third green stage 10.890
SRR8316898Complete white stage 4.174
SRR8316899Complete white stage 20.009
SRR8316903Complete white stage 7.914
SRR8316902Silver flowering stage2.446
SRR8316904Silver flowering stage3.963
SRR8316905Silver flowering stage3.052
SRR8316906Gold flowering stage 2.937
SRR8316907Gold flowering stage 3.221
SRR8316908Gold flowering stage 0.770
SRP132670SRR6706286Control1.187
SRR6706287Light intensity 50%0.912
SRR6706288Light intensity 20%1.855
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.507
CNS0095593Slightly white alabastrum(diploid) 217.192
CNS0095594Slightly white alabastrum(diploid) 38.398
CNS0095595Whole white alabastrum(diploid) 212.585
CNS0095596Whole white alabastrum(diploid) 316.072
CNS0095597Whole white alabastrum(diploid) 417.260
CNS0095598Silvery flower (diploied) 11.750
CNS0095599Silvery flower (diploied) 23.546
CNS0095600Silvery flower (diploied) 32.900
CNS0095601Golden flower (diploid) 10.473
CNS0095602Golden flower (diploid) 20.117
CNS0095603Golden flower (diploid) 30.588
CNS0095604Slightly white alabastrum(tetraploid) 111.120
CNS0095605Slightly white alabastrum(tetraploid) 210.301
CNS0095606Slightly white alabastrum(tetraploid) 322.977
CNS0095607Whole white alabastrum(tetraploid) 17.662
CNS0095608Whole white alabastrum(tetraploid) 25.367
CNS0095609Whole white alabastrum(tetraploid) 36.315
CNS0095610Silvery flower (tetraploid) 10.561
CNS0095611Silvery flower (tetraploid) 21.927
CNS0095612Silvery flower (tetraploid) 32.096
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.366
CNS0095615Golden flower (tetraploid) 30.778
CRA001975CRR073297Stem 15.359
CRR073298Stem 22.695
CRR073299Stem 37.597
CRR073300Leaf 16.465
CRR073301Leaf 22.180
CRR073302Leaf 33.236
CRR073303Juvenile bud 12.854
CRR073304Juvenile bud 21.898
CRR073305Juvenile bud 34.708
CRR073306Third green 17.376
CRR073307Third green 214.027
CRR073308Third green 310.430
CRR073309Second white 15.125
CRR073310Second white 21.678
CRR073311Second white 30.829
CRR073312Silver flowering 10.293
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.506
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000