Detail information of GWHGAAZE030188


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrBAF46265.18.69545E-83putative transcription factor [Humulus lupulus]
Swissprottr|P81393|MYB08_ANTMA2E-83Myb-related protein 308
trEMBLtr|A2Q124|A2Q124_HUMLU3E-83Putative transcription factor {ECO:0000313|EMBL:BAF46265.1}
TAIR10AT4G38620.11E-66myb domain protein 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3926746639268112-
GWHAAZE00000009mRNA3926746639268112-
GWHAAZE00000009exon3926746639267574-
GWHAAZE00000009exon3926785039268112-
GWHAAZE00000009CDS3926785039268112-
GWHAAZE00000009CDS3926746639267574-
Transcript Sequence

Network for GWHGAAZE030188

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.32Myb_DNA-binding14611.00E-14
PF00249.32Myb_DNA-binding671115.50E-17
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf56.822
SRR3591706second leaf33.835
SRR3591707mature leaf23.380
SRR3591708Shoot apex33.622
SRR3591709Stem24.975
SRR3591710White floral bud390.988
SRR3591711White flower403.363
SRR3591712Green floral bud37.748
SRR3591713Yellow flower235.120
SRP173429 SRR8316895Juvenile bud stage 23.166
SRR8316896Juvenile bud stage 39.015
SRR8316897Juvenile bud stage 11.774
SRR8316894Third green stage 11.951
SRR8316900Third green stage 26.239
SRR8316901Third green stage 32.983
SRR8316898Complete white stage 222.251
SRR8316899Complete white stage 50.032
SRR8316903Complete white stage 324.163
SRR8316902Silver flowering stage212.139
SRR8316904Silver flowering stage284.628
SRR8316905Silver flowering stage164.734
SRR8316906Gold flowering stage 400.473
SRR8316907Gold flowering stage 407.013
SRR8316908Gold flowering stage 448.121
SRP132670SRR6706286Control79.848
SRR6706287Light intensity 50%84.393
SRR6706288Light intensity 20%38.599
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.690
CNS0095593Slightly white alabastrum(diploid) 211.523
CNS0095594Slightly white alabastrum(diploid) 313.426
CNS0095595Whole white alabastrum(diploid) 26.219
CNS0095596Whole white alabastrum(diploid) 34.842
CNS0095597Whole white alabastrum(diploid) 45.712
CNS0095598Silvery flower (diploied) 160.446
CNS0095599Silvery flower (diploied) 292.719
CNS0095600Silvery flower (diploied) 3396.323
CNS0095601Golden flower (diploid) 165.733
CNS0095602Golden flower (diploid) 2197.551
CNS0095603Golden flower (diploid) 3197.489
CNS0095604Slightly white alabastrum(tetraploid) 114.506
CNS0095605Slightly white alabastrum(tetraploid) 212.733
CNS0095606Slightly white alabastrum(tetraploid) 326.410
CNS0095607Whole white alabastrum(tetraploid) 115.251
CNS0095608Whole white alabastrum(tetraploid) 211.585
CNS0095609Whole white alabastrum(tetraploid) 320.348
CNS0095610Silvery flower (tetraploid) 1357.425
CNS0095611Silvery flower (tetraploid) 2412.801
CNS0095612Silvery flower (tetraploid) 3671.869
CNS0095613Golden flower (tetraploid) 1302.696
CNS0095614Golden flower (tetraploid) 2246.297
CNS0095615Golden flower (tetraploid) 3283.539
CRA001975CRR073297Stem 159.326
CRR073298Stem 248.795
CRR073299Stem 352.837
CRR073300Leaf 152.457
CRR073301Leaf 262.766
CRR073302Leaf 360.995
CRR073303Juvenile bud 157.276
CRR073304Juvenile bud 2216.154
CRR073305Juvenile bud 362.095
CRR073306Third green 11133.609
CRR073307Third green 2922.176
CRR073308Third green 3884.747
CRR073309Second white 1556.085
CRR073310Second white 2981.876
CRR073311Second white 3587.565
CRR073312Silver flowering 1347.168
CRR073313Silver flowering 2311.407
CRR073314Silver flowering 3333.343
CRR073315Gold flowering 116.383
CRR073316Gold flowering 216.612
CRR073317Gold flowering 314.507
CRR073318Tawny withering 130.944
CRR073319Tawny withering 226.155
CRR073320Tawny withering 324.324