Detail information of GWHGAAZE030189


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAIU34462.10putative ascorbate peroxidase, partial [Taraxacum brevicorniculatum]
COGYP_008055672.15E-17catalase/hydroperoxidase HPI(I)
Swissprottr|Q42564|APX3_ARATH2E-163L-ascorbate peroxidase 3, peroxisomal (Precursor)
trEMBLtr|A0A097NU85|A0A097NU85_9ASTR0Putative ascorbate peroxidase {ECO:0000313|EMBL:AIU34462.1} (Fragment)
TAIR10AT4G35000.11E-118ascorbate peroxidase 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3927755039288155-
GWHAAZE00000009mRNA3927755039288155-
GWHAAZE00000009exon3928804339288155-
GWHAAZE00000009exon3928780839287932-
GWHAAZE00000009exon3928550439285553-
GWHAAZE00000009exon3928385739283922-
GWHAAZE00000009exon3928359039283638-
GWHAAZE00000009exon3927982539279907-
GWHAAZE00000009exon3927962239279701-
GWHAAZE00000009exon3927941139279513-
GWHAAZE00000009exon3927755039277741-
GWHAAZE00000009CDS3928804339288155-
GWHAAZE00000009CDS3928780839287932-
GWHAAZE00000009CDS3928550439285553-
GWHAAZE00000009CDS3928385739283922-
GWHAAZE00000009CDS3928359039283638-
GWHAAZE00000009CDS3927982539279907-
GWHAAZE00000009CDS3927962239279701-
GWHAAZE00000009CDS3927941139279513-
GWHAAZE00000009CDS3927755039277741-
Transcript Sequence

Network for GWHGAAZE030189

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00141.24peroxidase182243.80E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00434E1.11.1.11 Metabolic pathways map01100
Ascorbate and aldarate metabolismmap00053
Glutathione metabolismmap00480

Gene Ontology

GO term OntologyName
GO:0006979biological_processresponse to oxidative stress
GO:0055114biological_processoxidation-reduction process
GO:0004601molecular_functionperoxidase activity
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf160.886
SRR3591706second leaf289.144
SRR3591707mature leaf319.416
SRR3591708Shoot apex140.927
SRR3591709Stem186.417
SRR3591710White floral bud242.670
SRR3591711White flower270.783
SRR3591712Green floral bud145.352
SRR3591713Yellow flower300.227
SRP173429 SRR8316895Juvenile bud stage 82.077
SRR8316896Juvenile bud stage 108.479
SRR8316897Juvenile bud stage 68.697
SRR8316894Third green stage 44.440
SRR8316900Third green stage 153.989
SRR8316901Third green stage 150.204
SRR8316898Complete white stage 105.963
SRR8316899Complete white stage 158.849
SRR8316903Complete white stage 164.026
SRR8316902Silver flowering stage165.496
SRR8316904Silver flowering stage205.536
SRR8316905Silver flowering stage114.455
SRR8316906Gold flowering stage 353.043
SRR8316907Gold flowering stage 336.419
SRR8316908Gold flowering stage 387.038
SRP132670SRR6706286Control185.882
SRR6706287Light intensity 50%182.636
SRR6706288Light intensity 20%186.583
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1134.254
CNS0095593Slightly white alabastrum(diploid) 2117.679
CNS0095594Slightly white alabastrum(diploid) 3121.073
CNS0095595Whole white alabastrum(diploid) 2113.313
CNS0095596Whole white alabastrum(diploid) 3130.602
CNS0095597Whole white alabastrum(diploid) 4105.507
CNS0095598Silvery flower (diploied) 1192.346
CNS0095599Silvery flower (diploied) 2207.700
CNS0095600Silvery flower (diploied) 3302.917
CNS0095601Golden flower (diploid) 1233.611
CNS0095602Golden flower (diploid) 2260.435
CNS0095603Golden flower (diploid) 3249.159
CNS0095604Slightly white alabastrum(tetraploid) 1129.419
CNS0095605Slightly white alabastrum(tetraploid) 2123.111
CNS0095606Slightly white alabastrum(tetraploid) 3149.935
CNS0095607Whole white alabastrum(tetraploid) 1121.252
CNS0095608Whole white alabastrum(tetraploid) 2145.368
CNS0095609Whole white alabastrum(tetraploid) 3176.815
CNS0095610Silvery flower (tetraploid) 1411.246
CNS0095611Silvery flower (tetraploid) 2392.738
CNS0095612Silvery flower (tetraploid) 3444.266
CNS0095613Golden flower (tetraploid) 1409.555
CNS0095614Golden flower (tetraploid) 2390.302
CNS0095615Golden flower (tetraploid) 3579.540
CRA001975CRR073297Stem 1128.001
CRR073298Stem 2112.217
CRR073299Stem 3142.787
CRR073300Leaf 1116.195
CRR073301Leaf 2122.604
CRR073302Leaf 3133.741
CRR073303Juvenile bud 1154.054
CRR073304Juvenile bud 2163.039
CRR073305Juvenile bud 3134.509
CRR073306Third green 1417.335
CRR073307Third green 2321.011
CRR073308Third green 3329.048
CRR073309Second white 1347.711
CRR073310Second white 2311.357
CRR073311Second white 3267.518
CRR073312Silver flowering 1267.408
CRR073313Silver flowering 2241.684
CRR073314Silver flowering 3252.498
CRR073315Gold flowering 1425.797
CRR073316Gold flowering 2414.035
CRR073317Gold flowering 3289.882
CRR073318Tawny withering 1138.169
CRR073319Tawny withering 2136.645
CRR073320Tawny withering 3119.623