Detail information of GWHGAAZE030194


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP14558.17.3474E-114unnamed protein product [Coffea canephora]
trEMBLtr|A0A068V3V1|A0A068V3V1_COFCA3E-114Coffea canephora DH200=94 genomic scaffold, scaffold_87 {ECO:0000313|EMBL:CDP14558.1}
TAIR10AT2G16770.16E-77Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3934009039340818+
GWHAAZE00000009mRNA3934009039340818+
GWHAAZE00000009exon3934009039340273+
GWHAAZE00000009exon3934030739340818+
GWHAAZE00000009CDS3934009039340273+
GWHAAZE00000009CDS3934030739340818+
Transcript Sequence

Network for GWHGAAZE030194

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07716.16bZIP_2641102.50E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003700molecular_functionDNA-binding transcription factor activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.000
SRR3591706second leaf12.156
SRR3591707mature leaf16.467
SRR3591708Shoot apex21.979
SRR3591709Stem24.406
SRR3591710White floral bud31.055
SRR3591711White flower28.044
SRR3591712Green floral bud28.035
SRR3591713Yellow flower27.336
SRP173429 SRR8316895Juvenile bud stage 4.650
SRR8316896Juvenile bud stage 8.323
SRR8316897Juvenile bud stage 2.459
SRR8316894Third green stage 4.312
SRR8316900Third green stage 8.405
SRR8316901Third green stage 7.155
SRR8316898Complete white stage 7.266
SRR8316899Complete white stage 18.265
SRR8316903Complete white stage 9.229
SRR8316902Silver flowering stage6.608
SRR8316904Silver flowering stage10.225
SRR8316905Silver flowering stage6.178
SRR8316906Gold flowering stage 24.291
SRR8316907Gold flowering stage 15.182
SRR8316908Gold flowering stage 25.672
SRP132670SRR6706286Control18.241
SRR6706287Light intensity 50%17.493
SRR6706288Light intensity 20%16.113
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.418
CNS0095593Slightly white alabastrum(diploid) 211.256
CNS0095594Slightly white alabastrum(diploid) 39.240
CNS0095595Whole white alabastrum(diploid) 26.401
CNS0095596Whole white alabastrum(diploid) 38.997
CNS0095597Whole white alabastrum(diploid) 49.611
CNS0095598Silvery flower (diploied) 113.687
CNS0095599Silvery flower (diploied) 26.632
CNS0095600Silvery flower (diploied) 313.489
CNS0095601Golden flower (diploid) 112.444
CNS0095602Golden flower (diploid) 216.219
CNS0095603Golden flower (diploid) 314.456
CNS0095604Slightly white alabastrum(tetraploid) 110.090
CNS0095605Slightly white alabastrum(tetraploid) 28.592
CNS0095606Slightly white alabastrum(tetraploid) 318.840
CNS0095607Whole white alabastrum(tetraploid) 19.645
CNS0095608Whole white alabastrum(tetraploid) 25.718
CNS0095609Whole white alabastrum(tetraploid) 38.687
CNS0095610Silvery flower (tetraploid) 124.341
CNS0095611Silvery flower (tetraploid) 228.448
CNS0095612Silvery flower (tetraploid) 327.966
CNS0095613Golden flower (tetraploid) 121.382
CNS0095614Golden flower (tetraploid) 222.311
CNS0095615Golden flower (tetraploid) 316.246
CRA001975CRR073297Stem 118.548
CRR073298Stem 216.666
CRR073299Stem 318.227
CRR073300Leaf 117.277
CRR073301Leaf 217.775
CRR073302Leaf 315.259
CRR073303Juvenile bud 112.187
CRR073304Juvenile bud 212.741
CRR073305Juvenile bud 315.309
CRR073306Third green 17.822
CRR073307Third green 27.089
CRR073308Third green 39.050
CRR073309Second white 110.195
CRR073310Second white 26.624
CRR073311Second white 35.487
CRR073312Silver flowering 111.746
CRR073313Silver flowering 213.050
CRR073314Silver flowering 38.642
CRR073315Gold flowering 129.640
CRR073316Gold flowering 226.283
CRR073317Gold flowering 329.122
CRR073318Tawny withering 148.209
CRR073319Tawny withering 234.873
CRR073320Tawny withering 318.920