Gene detail

Detail information of GWHGAAZE030346

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007210883.1	0	hypothetical protein PRUPE_ppa002837mg [Prunus persica]
COG	YP_003112167.1	2E-26	serine/threonine protein kinase
Swissprot	tr\|Q9LV37\|MPK9_ARATH	0	Mitogen-activated protein kinase 9
trEMBL	tr\|M5WE81\|M5WE81_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ12082.1}
TAIR10	AT3G18040.1	0	MAP kinase 9

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	42116049	42121748	+
GWHAAZE00000009	mRNA	42116049	42121748	+
GWHAAZE00000009	exon	42116049	42116451	+
GWHAAZE00000009	exon	42116537	42116664	+
GWHAAZE00000009	exon	42116769	42116828	+
GWHAAZE00000009	exon	42118449	42118598	+
GWHAAZE00000009	exon	42118680	42118835	+
GWHAAZE00000009	exon	42118977	42119114	+
GWHAAZE00000009	exon	42119196	42119269	+
GWHAAZE00000009	exon	42119936	42120040	+
GWHAAZE00000009	exon	42120256	42120517	+
GWHAAZE00000009	exon	42121550	42121748	+
GWHAAZE00000009	CDS	42116049	42116451	+
GWHAAZE00000009	CDS	42116537	42116664	+
GWHAAZE00000009	CDS	42116769	42116828	+
GWHAAZE00000009	CDS	42118449	42118598	+
GWHAAZE00000009	CDS	42118680	42118835	+
GWHAAZE00000009	CDS	42118977	42119114	+
GWHAAZE00000009	CDS	42119196	42119269	+
GWHAAZE00000009	CDS	42119936	42120040	+
GWHAAZE00000009	CDS	42120256	42120517	+
GWHAAZE00000009	CDS	42121550	42121621	+
GWHAAZE00000009	three_prime_UTR	42121622	42121748	+

Transcript Sequence
>GWHTAAZE030380 CTTGAGGCAGAATTTTTCACCGAGTATGGCGAAGCAAACAGATACCAAATTCAAGAAGTTGTTGGCAAGGGTAGTTATGGTGTTGTGGGTTCTGCAATTGATACCAAAACCGGTGAAAAGGTTGCAATTAAGAAGATCAATGATGTTTTTGAACATGTCTCTGATGCCACACGCATTCTGAGAGAAATCAAGCTCCTTCGACTGCTCCGTCATCCAGATATTGTAGAAATAAAACATATTATGCTCCCTCCTTCTCGAAGAGAGTTTAAAGATATCTATGTTGTTTTTGAATTGATGGAATCTGATCTTCATCAAGTAATAAAGGCGAATGACGACCTTACACCTGAACATTATCAGTTTTTCTTGTACCAGCTCCTTCGTGGCCTAAAATATATACACACAGCTAATGTGTTTCATCGAGATTTAAAGCCTAAAAATATCCTTGCTAATGCTGACTGTAAGTTGAAGATTTGTGATTTTGGTCTTGCTCGTGTATCATTTAATGATGCCCCATCAGCTATATTCTGGACTGACTATGTGGCAACTCGATGGTATCGTGCTCCTGAACTCTGTGGCTCCTTTTTCTCCAAATATACTCCTGCAATTGATATTTGGAGCATTGGGTGCATATTTGCAGAGATGCTTAGTGGGAAACCATTGTTTCCTGGGAAAAATGTGGTACACCAATTGGATCTCATGACTGATTTGCTTGGTACTCCTTCCCCTGAATCTATTGCACGGATTCGAAATGAGAAGGCAAGAAGATATCTTAGTAGCATGCGTAAAAAACAGCCAGTTCCATTTTCACAGAAATTTCCAAATGCAGATCCTTTGGCTCTTTGCTTGCTTGAGCGCTTGCTTGCATTTGATCCTAAAGATCGACCACCGGCTGAAGAGGCACTTGCTGATCCTTACTTTCGTGGTCTGGCAAACGTTGAGCGCGAACCATCAACCCAACCCATATCAAAACTGGAATTTGAGTTTGAAAGGAGGAAATTGGCAAAAGATGATGTTAGAGAGTTGATCTATAGAGAGATTTTAGAGTATCACCCTCATATGCTTCAGGAGTATCTTCGTGGTGGGGAACAGACTAGCTTCATGTACCCAAGTGGTGTTGATCGGTTTAAGAGACAGTTTGCCCATCTTGAGGAGCACTACGGTAAAGGAGAAAGAGGTACTCCTCCACTTCAAAGGCAGCATGCTTCTTTGCCTAGAGAGAGAGTTCCGGCTCCGAAGGATGAAAATGCTGCTGGTGATGATAATGATTTCGAGAAGAGGACTGCAGCTTCTGTCGCTACAACACTGGAGAGCCCTCCAGGGGGATCAGAAAATGGACCCAATAAGGGAAATTACAGTGCTCGTAGCTTGTTAAAGAGTGCTAGTATTAGTGCTTCTAAGTGTATAGGTGTCAAAGGAACAAAAGCTCCAGAGGTATATATTCATTACCCGCTAATGTTTCTTGTTCATTTTTTGGCAGAAGAACCGATTGCTGAGCAACCCGAAGAGGTTGATGGATTGGCCCAAAAGGTTGCAAGCCTACATGCTTGATTATATTCTGAAGCAATTTTCCCAAAAGAGTCGGATGGCTTAATTATATATTAGCCCCACAGCTTCATCGCAAGCTATAATTATCTTAATTTATTACCTTTGAGTTCAAGGTAGAAGTAACAGCAGT

Network for GWHGAAZE030346

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	15	306	1.70E-66

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_MAPK

KEGG pathway

KO	Enzyme	pathway	mapID
K20538	MPK8	MAPK signaling pathway - plant	map04016

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding
GO:0004707	molecular_function	MAP kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	77.847
	SRR3591706	second leaf	32.086
	SRR3591707	mature leaf	24.357
	SRR3591708	Shoot apex	53.712
	SRR3591709	Stem	56.224
	SRR3591710	White floral bud	85.867
	SRR3591711	White flower	51.001
	SRR3591712	Green floral bud	105.142
	SRR3591713	Yellow flower	50.474
SRP173429	SRR8316895	Juvenile bud stage	34.366
	SRR8316896	Juvenile bud stage	55.638
	SRR8316897	Juvenile bud stage	36.096
	SRR8316894	Third green stage	20.877
	SRR8316900	Third green stage	89.391
	SRR8316901	Third green stage	85.928
	SRR8316898	Complete white stage	19.391
	SRR8316899	Complete white stage	47.859
	SRR8316903	Complete white stage	31.968
	SRR8316902	Silver flowering stage	12.848
	SRR8316904	Silver flowering stage	16.954
	SRR8316905	Silver flowering stage	8.541
	SRR8316906	Gold flowering stage	20.442
	SRR8316907	Gold flowering stage	22.695
	SRR8316908	Gold flowering stage	28.400
SRP132670	SRR6706286	Control	45.372
	SRR6706287	Light intensity 50%	46.361
	SRR6706288	Light intensity 20%	48.678
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	43.742
	CNS0095593	Slightly white alabastrum(diploid) 2	42.605
	CNS0095594	Slightly white alabastrum(diploid) 3	38.884
	CNS0095595	Whole white alabastrum(diploid) 2	89.970
	CNS0095596	Whole white alabastrum(diploid) 3	90.306
	CNS0095597	Whole white alabastrum(diploid) 4	109.502
	CNS0095598	Silvery flower (diploied) 1	29.625
	CNS0095599	Silvery flower (diploied) 2	32.758
	CNS0095600	Silvery flower (diploied) 3	38.453
	CNS0095601	Golden flower (diploid) 1	29.392
	CNS0095602	Golden flower (diploid) 2	48.501
	CNS0095603	Golden flower (diploid) 3	45.813
	CNS0095604	Slightly white alabastrum(tetraploid) 1	60.701
	CNS0095605	Slightly white alabastrum(tetraploid) 2	52.900
	CNS0095606	Slightly white alabastrum(tetraploid) 3	36.204
	CNS0095607	Whole white alabastrum(tetraploid) 1	109.754
	CNS0095608	Whole white alabastrum(tetraploid) 2	131.860
	CNS0095609	Whole white alabastrum(tetraploid) 3	96.234
	CNS0095610	Silvery flower (tetraploid) 1	29.444
	CNS0095611	Silvery flower (tetraploid) 2	29.618
	CNS0095612	Silvery flower (tetraploid) 3	22.128
	CNS0095613	Golden flower (tetraploid) 1	19.572
	CNS0095614	Golden flower (tetraploid) 2	24.339
	CNS0095615	Golden flower (tetraploid) 3	29.611
CRA001975	CRR073297	Stem 1	37.335
	CRR073298	Stem 2	40.125
	CRR073299	Stem 3	33.960
	CRR073300	Leaf 1	67.483
	CRR073301	Leaf 2	54.756
	CRR073302	Leaf 3	41.670
	CRR073303	Juvenile bud 1	58.535
	CRR073304	Juvenile bud 2	58.949
	CRR073305	Juvenile bud 3	35.014
	CRR073306	Third green 1	30.718
	CRR073307	Third green 2	35.522
	CRR073308	Third green 3	30.037
	CRR073309	Second white 1	11.879
	CRR073310	Second white 2	10.249
	CRR073311	Second white 3	15.258
	CRR073312	Silver flowering 1	33.937
	CRR073313	Silver flowering 2	33.333
	CRR073314	Silver flowering 3	32.966
	CRR073315	Gold flowering 1	28.215
	CRR073316	Gold flowering 2	31.932
	CRR073317	Gold flowering 3	22.348
	CRR073318	Tawny withering 1	66.587
	CRR073319	Tawny withering 2	60.032
	CRR073320	Tawny withering 3	72.173