Gene detail

Detail information of GWHGAAZE030373

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CBI15500.3	0	unnamed protein product [Vitis vinifera]
COG	YP_003716063.1	2E-83	N-acetylglucosaminyl transferase
trEMBL	tr\|D7SJ39\|D7SJ39_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI15500.3}
TAIR10	AT1G73740.1	4E-113	UDP-Glycosyltransferase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	42477853	42480688	+
GWHAAZE00000009	mRNA	42477853	42480688	+
GWHAAZE00000009	exon	42477853	42477965	+
GWHAAZE00000009	exon	42478064	42478885	+
GWHAAZE00000009	exon	42479913	42480021	+
GWHAAZE00000009	exon	42480332	42480467	+
GWHAAZE00000009	exon	42480564	42480688	+
GWHAAZE00000009	CDS	42477853	42477965	+
GWHAAZE00000009	CDS	42478064	42478885	+
GWHAAZE00000009	CDS	42479913	42480021	+
GWHAAZE00000009	CDS	42480332	42480467	+
GWHAAZE00000009	CDS	42480564	42480688	+

Transcript Sequence
>GWHTAAZE030407 ATGGCCACTTCTATCTCCCACTCTTCTTCATTCTTTCCAAAGTTCCCTCATCTCCATGGCTACCACCCTTCTCTTACCAACTTTACTCTTCTTACCCTCTTCCCCAAATCAAGGAACTTAAAATTGATCCACTGTCTATCCTTGAACCAACCCATCAATCAAAATGCCAATGCCACCAATCTCCGTGTGGTCTTCGCCGCCGGCGGAACCGGCGGCCACATCTACCCTGCAGTAGCCATCGCCGACGACCTCAAAACCCTAGACCCAAATGCCCAAATCCTCTTCGTTGGAACACCCACCGGCATGGAGAGCACCGCCGTACCCTCCGCCGGCTACCAATTCACCACCATCTCCGCCCACCCATTAGCTCGCCCCCTCATCTCCCCTCAAAACCTCTTCATCTTCCCTTACCTACTAGTCAGATCCCTAATTCAAAGTTGGCGCAGACTTCGAGATTTCAACCCCCAGATTGTTGTGGGTACCGGTGGCTATGTATCTTTTCCTACTTGCGCTGCGGCCGTTCTCAGAGGGATCACGCTAATAATCCAAGAACAGAATTCGGTACCCGGGATAGCCAATTGGGTATTGTCTCTTTTCGCGAAGAAGGTGTTTGTTGCATTTAATTCAACTGAGAATTTTCCGAGGCATAAGTGTTTGGTAAGTGGGAATCCGGTGCGGTTGTCATTGCGGCGGAATGCGTCCAAGGCCGTGGCGTTTAAGCATTTCTTTCCCAAGGTGGGGGAGTATGAGGGTAAGGTTGTGTTGGTACTAGGAGGGTCTTTAGGTGCAAATGCTATCAACATAGCGCTGCTGAATTTGTATTATCAGATGCTGTTGGAGAGGAAGGGTTTGTTTATCATTTGGCAGACAGGTGTGGAATCATTTGATGAGATGGAGAGTCTTGTGAAGAATCATCCACATTTGATTCTTACTCCGTTCTTGCATTCTATGGATTTGGCATATGCTGCTGCAGACCTTATTGTTTCAAGATCTGGGGCAATGACTTGTAGTGAGATCTTGGCCATTGGGAGACCTGCTATTTTGATACCCTCTCCAAATGTTGCGGAAGGACATCAAATGAAAAATGCATTTTTAATGGCGGATTTAGCAGGTTCAAAGGTTATAACCGAAGATGAACTTGATTCAACTACACTCAGAACCGCAATTGAAGAAATCATAGAGAATGAGAGCCTAATGACAGATATGTCTGAGAGAGCTTTGAAAGTTGCCAGACCCAATGCCTCTGTTGAGATTGCACAGCAAATTCTTTCCATAGTCAATTCATCAGTACCAAAGGAGAAGTAA

Network for GWHGAAZE030373

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03033.21	Glyco_transf_28	63	204	4.10E-34
PF04101.17	Glyco_tran_28_C	253	406	7.60E-33

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K02563	murG	Metabolic pathways	map01100
		Peptidoglycan biosynthesis	map00550
		Cell cycle - Caulobacter	map04112

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0030259	biological_process	lipid glycosylation
GO:0016758	molecular_function	transferase activity, transferring hexosyl groups
GO:0050511	molecular_function	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	16.819
	SRR3591706	second leaf	22.800
	SRR3591707	mature leaf	11.965
	SRR3591708	Shoot apex	20.107
	SRR3591709	Stem	11.030
	SRR3591710	White floral bud	2.775
	SRR3591711	White flower	2.647
	SRR3591712	Green floral bud	7.837
	SRR3591713	Yellow flower	0.583
SRP173429	SRR8316895	Juvenile bud stage	5.557
	SRR8316896	Juvenile bud stage	6.360
	SRR8316897	Juvenile bud stage	2.195
	SRR8316894	Third green stage	4.219
	SRR8316900	Third green stage	10.127
	SRR8316901	Third green stage	7.016
	SRR8316898	Complete white stage	0.914
	SRR8316899	Complete white stage	5.542
	SRR8316903	Complete white stage	1.252
	SRR8316902	Silver flowering stage	0.131
	SRR8316904	Silver flowering stage	0.411
	SRR8316905	Silver flowering stage	0.102
	SRR8316906	Gold flowering stage	1.167
	SRR8316907	Gold flowering stage	0.473
	SRR8316908	Gold flowering stage	0.702
SRP132670	SRR6706286	Control	6.009
	SRR6706287	Light intensity 50%	6.080
	SRR6706288	Light intensity 20%	5.972
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	4.786
	CNS0095593	Slightly white alabastrum(diploid) 2	4.171
	CNS0095594	Slightly white alabastrum(diploid) 3	2.418
	CNS0095595	Whole white alabastrum(diploid) 2	4.838
	CNS0095596	Whole white alabastrum(diploid) 3	4.425
	CNS0095597	Whole white alabastrum(diploid) 4	3.353
	CNS0095598	Silvery flower (diploied) 1	3.679
	CNS0095599	Silvery flower (diploied) 2	2.853
	CNS0095600	Silvery flower (diploied) 3	1.280
	CNS0095601	Golden flower (diploid) 1	0.748
	CNS0095602	Golden flower (diploid) 2	1.582
	CNS0095603	Golden flower (diploid) 3	1.267
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.036
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.284
	CNS0095606	Slightly white alabastrum(tetraploid) 3	8.761
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.176
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.276
	CNS0095609	Whole white alabastrum(tetraploid) 3	4.242
	CNS0095610	Silvery flower (tetraploid) 1	0.374
	CNS0095611	Silvery flower (tetraploid) 2	0.592
	CNS0095612	Silvery flower (tetraploid) 3	0.346
	CNS0095613	Golden flower (tetraploid) 1	0.031
	CNS0095614	Golden flower (tetraploid) 2	0.687
	CNS0095615	Golden flower (tetraploid) 3	0.179
CRA001975	CRR073297	Stem 1	13.312
	CRR073298	Stem 2	12.191
	CRR073299	Stem 3	9.224
	CRR073300	Leaf 1	8.569
	CRR073301	Leaf 2	9.750
	CRR073302	Leaf 3	10.786
	CRR073303	Juvenile bud 1	5.819
	CRR073304	Juvenile bud 2	3.812
	CRR073305	Juvenile bud 3	5.573
	CRR073306	Third green 1	1.043
	CRR073307	Third green 2	0.426
	CRR073308	Third green 3	1.079
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.068
	CRR073311	Second white 3	0.123
	CRR073312	Silver flowering 1	0.314
	CRR073313	Silver flowering 2	0.494
	CRR073314	Silver flowering 3	0.308
	CRR073315	Gold flowering 1	1.248
	CRR073316	Gold flowering 2	0.943
	CRR073317	Gold flowering 3	1.561
	CRR073318	Tawny withering 1	7.965
	CRR073319	Tawny withering 2	4.271
	CRR073320	Tawny withering 3	8.270