Detail information of GWHGAAZE030583


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006476705.17.8884E-130PREDICTED: transcription factor bHLH79-like [Citrus sinensis]
Swissprottr|Q9LV17|BH079_ARATH8E-85Transcription factor bHLH79
trEMBLtr|A0A067FUM3|A0A067FUM3_CITSI6E-129Uncharacterized protein {ECO:0000313|EMBL:KDO69860.1}
TAIR10AT5G62610.12E-64basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4564971745653012-
GWHAAZE00000009mRNA4564971745653012-
GWHAAZE00000009exon4564971745649851-
GWHAAZE00000009exon4565121345651284-
GWHAAZE00000009exon4565138845651456-
GWHAAZE00000009exon4565167745651742-
GWHAAZE00000009exon4565184245652042-
GWHAAZE00000009exon4565273445653012-
GWHAAZE00000009CDS4565273445653012-
GWHAAZE00000009CDS4565184245652042-
GWHAAZE00000009CDS4565167745651742-
GWHAAZE00000009CDS4565138845651456-
GWHAAZE00000009CDS4565121345651284-
GWHAAZE00000009CDS4564971745649851-
Transcript Sequence

Network for GWHGAAZE030583

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.27HLH1542012.20E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983molecular_functionprotein dimerization activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf40.580
SRR3591706second leaf32.111
SRR3591707mature leaf20.071
SRR3591708Shoot apex48.858
SRR3591709Stem24.071
SRR3591710White floral bud911.557
SRR3591711White flower844.549
SRR3591712Green floral bud479.019
SRR3591713Yellow flower470.399
SRP173429 SRR8316895Juvenile bud stage 63.969
SRR8316896Juvenile bud stage 82.424
SRR8316897Juvenile bud stage 49.167
SRR8316894Third green stage 37.985
SRR8316900Third green stage 155.632
SRR8316901Third green stage 222.229
SRR8316898Complete white stage 619.185
SRR8316899Complete white stage 609.613
SRR8316903Complete white stage 821.584
SRR8316902Silver flowering stage536.697
SRR8316904Silver flowering stage759.235
SRR8316905Silver flowering stage484.731
SRR8316906Gold flowering stage 1168.242
SRR8316907Gold flowering stage 957.344
SRR8316908Gold flowering stage 763.642
SRP132670SRR6706286Control407.526
SRR6706287Light intensity 50%511.640
SRR6706288Light intensity 20%451.549
CNP0000432CNS0095592Slightly white alabastrum(diploid) 182.111
CNS0095593Slightly white alabastrum(diploid) 288.546
CNS0095594Slightly white alabastrum(diploid) 377.587
CNS0095595Whole white alabastrum(diploid) 296.215
CNS0095596Whole white alabastrum(diploid) 3102.958
CNS0095597Whole white alabastrum(diploid) 4114.487
CNS0095598Silvery flower (diploied) 1168.759
CNS0095599Silvery flower (diploied) 2268.733
CNS0095600Silvery flower (diploied) 3778.500
CNS0095601Golden flower (diploid) 1178.895
CNS0095602Golden flower (diploid) 2346.081
CNS0095603Golden flower (diploid) 3343.264
CNS0095604Slightly white alabastrum(tetraploid) 1163.464
CNS0095605Slightly white alabastrum(tetraploid) 2133.217
CNS0095606Slightly white alabastrum(tetraploid) 3262.321
CNS0095607Whole white alabastrum(tetraploid) 1121.812
CNS0095608Whole white alabastrum(tetraploid) 2150.324
CNS0095609Whole white alabastrum(tetraploid) 3301.696
CNS0095610Silvery flower (tetraploid) 1739.880
CNS0095611Silvery flower (tetraploid) 2524.242
CNS0095612Silvery flower (tetraploid) 3497.206
CNS0095613Golden flower (tetraploid) 1396.025
CNS0095614Golden flower (tetraploid) 2481.383
CNS0095615Golden flower (tetraploid) 3434.112
CRA001975CRR073297Stem 166.409
CRR073298Stem 279.001
CRR073299Stem 367.811
CRR073300Leaf 1131.274
CRR073301Leaf 2108.486
CRR073302Leaf 3134.137
CRR073303Juvenile bud 1188.119
CRR073304Juvenile bud 2949.473
CRR073305Juvenile bud 3170.710
CRR073306Third green 11138.653
CRR073307Third green 2839.605
CRR073308Third green 3857.650
CRR073309Second white 1629.976
CRR073310Second white 2538.838
CRR073311Second white 3415.699
CRR073312Silver flowering 1293.936
CRR073313Silver flowering 2245.669
CRR073314Silver flowering 3249.834
CRR073315Gold flowering 14.947
CRR073316Gold flowering 26.209
CRR073317Gold flowering 39.068
CRR073318Tawny withering 111.290
CRR073319Tawny withering 210.288
CRR073320Tawny withering 311.911