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Detail information of GWHGAAZE030587
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_007210331.1
0
hypothetical protein PRUPE_ppa002060mg [Prunus persica]
trEMBL
tr|M5WXJ6|M5WXJ6_PRUPE
0
Uncharacterized protein {ECO:0000313|EMBL:EMJ11530.1}
TAIR10
AT1G18950.1
7E-163
DDT domain superfamily
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000009
gene
45706485
45714703
+
GWHAAZE00000009
mRNA
45706485
45714703
+
GWHAAZE00000009
exon
45706485
45707000
+
GWHAAZE00000009
exon
45707079
45707193
+
GWHAAZE00000009
exon
45708725
45708804
+
GWHAAZE00000009
exon
45708956
45709042
+
GWHAAZE00000009
exon
45709148
45709185
+
GWHAAZE00000009
exon
45709265
45709346
+
GWHAAZE00000009
exon
45710122
45710228
+
GWHAAZE00000009
exon
45710361
45710517
+
GWHAAZE00000009
exon
45712333
45712425
+
GWHAAZE00000009
exon
45712644
45712767
+
GWHAAZE00000009
exon
45713480
45713522
+
GWHAAZE00000009
exon
45713681
45713869
+
GWHAAZE00000009
exon
45713950
45714703
+
GWHAAZE00000009
CDS
45706485
45707000
+
GWHAAZE00000009
CDS
45707079
45707193
+
GWHAAZE00000009
CDS
45708725
45708804
+
GWHAAZE00000009
CDS
45708956
45709042
+
GWHAAZE00000009
CDS
45709148
45709185
+
GWHAAZE00000009
CDS
45709265
45709346
+
GWHAAZE00000009
CDS
45710122
45710228
+
GWHAAZE00000009
CDS
45710361
45710517
+
GWHAAZE00000009
CDS
45712333
45712425
+
GWHAAZE00000009
CDS
45712644
45712767
+
GWHAAZE00000009
CDS
45713480
45713522
+
GWHAAZE00000009
CDS
45713681
45713869
+
GWHAAZE00000009
CDS
45713950
45714703
+
Transcript Sequence
>GWHTAAZE030621 ATGATCGCTCATGTTAGGGTTTCTGTAGAGAACCACCGCTCTTTACTCCCCGATCTATCCACCATGTCCGATGAACACCCCTCCTCTCCGATCCACTCCCCTCAACACTCCCCAAGCAATCACAACACTCAAAACAACAACGAGAACATCAAAGAAAGAGAAAGTGAAATCAACGGCAACAACGATAATAGTAGCAACAATAATAAGAACAGTAACAACAATTTAGTAGTAGTCAGAAGGGAACGTCCCTCTAGGGCTTGTACAGTTCGCTCGGCAGCACGGCTACATGCTGCGGCGGCGGCAGAGGCAGCTGTTTTTGGTTCGGAGCGGAAGCGGAAGGTTGTTAGAAGAGAGAGGCCTCCGCCGGAGGAGGAATCTCCACCGCCTTCGCCACCTCAGCAGCAGCAGTTCAGCAAGATTGTGACTCCGCTGGTGGGGGAGCCACCGCCGTCACAGTTGCCCCGGTGGAATATCCGGTCTATGTGGGAATTGGCTTCCATACTTAATTTCTTGAATGTTTTTAGGCCTCTTTTGAATATCAAAGTGGAGTTGTCTGTGGAGGAGTTCGAAACAGCTTTGATTACGCCAAATAGTACATTGGGTGACATACATATGCCTTTGTTGAAGGTTGGAAGAAGAGATTTGTCTGCCCAATGGTTTTGCTCTCAGTCTCTTTTTTCTCATGGTTATGGGAATTTTAAGTTATTAAAGGCGATCCCTCCGATTACTCGGATGGCACTTGGACAAAATACTTGGGTTACTGTTCTATGCAGAAAGTTGAGAGATTGGTGGCATTGGGTTGCGGATGGGGAGATACCTATAGTTGCATCACATGGGGCCGAGGTCGAAGCATATAATACACTTGATCCCGCTGTACGTGTGGTGATTCTGAAAGCCTTGTGTGATATTCGAGTTGAGCAAGAAGACATTCGAAATTATATAGAAGACTCCATAAAACATGGTGTTCATCTTTCAGCATTTCGTAAGGAGCGTATTGGGGGTGATTCTCATGGAATATCATATTGGTATGAAGATGACCCTGTAATTGGTCAGCGGTTGTACAGGGAGATTAAAAAAGTGGAGGTGAAGAAAGGGAAGGGGAAAAATGTACAGCCCATTCCTAGTTCATGTTACCAGTGGGAAACTGTTGCGACAAATTTGGATGAATTTCAGGATGTTTCGGAAAAGCTTTTCTCCAGCAAAAATAGAACCGAGGCTTCAGTTGGAAAGAAACTGAAAATCGACATGCTTCCTGAGATTGAGAAGGTTCATAAGAGAAGAGAAAAGTTGCTAAAGAAACAACACAGACAAGCTCTTCTTCTTGATAATATGATGAATATGGATGAACTTGGTCCTGGACGATCCCTTCGTGGTAGAAAACCCGTCTCCTATACTTTTGATGATTATGACCGATCAATCAATGAGGCTATCAAGATAACCAAAAGGAAACAGCCGTCCCCAGAACCTACTAATGTTAGAAGAGAAGGCCTGAGAACTGATGCCTCACCAAATGGTAAATGGGACGGTCCTTCGCAAAATCCTCAACATGTCTCTTTCAGTCCACCATCTCCACAATCACTTGATTTTGAAGATACAGACGACGACCATAAATCTGAACAATTAGATCGCAGCAATCGACGAAGGCAGAGGCCTCAACGATATTCGGCAAGGGAGTTTGTTGAAGCAGTTTCGGATATCGAGGCTGACTTTGACAGCGATGATGATATAGTTGGTGAAGCCGTATATGATGAAGAATATTTAAGGAAGCGGAAAGAAAGGAGAAGGATGTCCAGCAGCTCTGAAGGAGACGAGGAGTATCGTTTCGATGGAGACAATGTTGAAGAGGAAGAAGAGGAGGAAGAAGAAGAGGAGGATTCCTTAAGTATGAGTGAGGACAGTGATGATCCCCAAAGATTTAAGAAAATGAAAATACAAGGCCGAACTAGGAGAGAAACTAAACTAAGGTCGGTTGGAGAGCTCCAGTCGGGCCTAAGACGTAGTAAAAGGGCTACAAGGAACCGTATTGATTACAAGCAATACGAGATGTCGGAATCGGAAAATGAAACAACAAAACCTGAGAAATCAAATGGTTCAGATAAGCATACAGATGCCAGTGATAACGCGGAGTTTTCAATGGAAAGTGAGGATTCCGAGGCAAATGATGATAACCCGGATGTGAAAATGGATCAACCTGTTGAAGGGCACCTGGAGACAGCGGAGGAAGTTCCTAACCAAGTGCCGAAGAAATTGGACAGTCTGAGTCAAGATGAAGTTGAAGGCGTGCAGAAAAGGCGTTTTCTTGATCTAAATGAGCTTGCTCCGGGTTCTGGCTTTGATGATGGTCCCACTTCGATTATGAAAGATGAAGATACAGATGATTTTTAA
Network for GWHGAAZE030587
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF15612.7
WHIM1
287
315
0.00015
Protein Sequence
>GWHPAAZE030605 MIAHVRVSVENHRSLLPDLSTMSDEHPSSPIHSPQHSPSNHNTQNNNENIKERESEINGNNDNSSNNNKNSNNNLVVVRRERPSRACTVRSAARLHAAAAAEAAVFGSERKRKVVRRERPPPEEESPPPSPPQQQQFSKIVTPLVGEPPPSQLPRWNIRSMWELASILNFLNVFRPLLNIKVELSVEEFETALITPNSTLGDIHMPLLKVGRRDLSAQWFCSQSLFSHGYGNFKLLKAIPPITRMALGQNTWVTVLCRKLRDWWHWVADGEIPIVASHGAEVEAYNTLDPAVRVVILKALCDIRVEQEDIRNYIEDSIKHGVHLSAFRKERIGGDSHGISYWYEDDPVIGQRLYREIKKVEVKKGKGKNVQPIPSSCYQWETVATNLDEFQDVSEKLFSSKNRTEASVGKKLKIDMLPEIEKVHKRREKLLKKQHRQALLLDNMMNMDELGPGRSLRGRKPVSYTFDDYDRSINEAIKITKRKQPSPEPTNVRREGLRTDASPNGKWDGPSQNPQHVSFSPPSPQSLDFEDTDDDHKSEQLDRSNRRRQRPQRYSAREFVEAVSDIEADFDSDDDIVGEAVYDEEYLRKRKERRRMSSSSEGDEEYRFDGDNVEEEEEEEEEEEDSLSMSEDSDDPQRFKKMKIQGRTRRETKLRSVGELQSGLRRSKRATRNRIDYKQYEMSESENETTKPEKSNGSDKHTDASDNAEFSMESEDSEANDDNPDVKMDQPVEGHLETAEEVPNQVPKKLDSLSQDEVEGVQKRRFLDLNELAPGSGFDDGPTSIMKDEDTDDF
Gene family
Gene family
subfamily
Transcription Factors Family
DDT
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
29.023
SRR3591706
second leaf
15.485
SRR3591707
mature leaf
19.126
SRR3591708
Shoot apex
27.658
SRR3591709
Stem
27.582
SRR3591710
White floral bud
31.017
SRR3591711
White flower
33.061
SRR3591712
Green floral bud
27.683
SRR3591713
Yellow flower
24.676
SRP173429
SRR8316895
Juvenile bud stage
17.227
SRR8316896
Juvenile bud stage
22.785
SRR8316897
Juvenile bud stage
11.526
SRR8316894
Third green stage
10.346
SRR8316900
Third green stage
26.457
SRR8316901
Third green stage
22.500
SRR8316898
Complete white stage
10.987
SRR8316899
Complete white stage
34.386
SRR8316903
Complete white stage
21.118
SRR8316902
Silver flowering stage
13.488
SRR8316904
Silver flowering stage
20.866
SRR8316905
Silver flowering stage
10.499
SRR8316906
Gold flowering stage
33.249
SRR8316907
Gold flowering stage
29.746
SRR8316908
Gold flowering stage
31.868
SRP132670
SRR6706286
Control
19.208
SRR6706287
Light intensity 50%
19.108
SRR6706288
Light intensity 20%
18.858
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
16.795
CNS0095593
Slightly white alabastrum(diploid) 2
16.030
CNS0095594
Slightly white alabastrum(diploid) 3
12.894
CNS0095595
Whole white alabastrum(diploid) 2
17.073
CNS0095596
Whole white alabastrum(diploid) 3
14.766
CNS0095597
Whole white alabastrum(diploid) 4
16.910
CNS0095598
Silvery flower (diploied) 1
24.418
CNS0095599
Silvery flower (diploied) 2
17.434
CNS0095600
Silvery flower (diploied) 3
28.219
CNS0095601
Golden flower (diploid) 1
19.670
CNS0095602
Golden flower (diploid) 2
29.564
CNS0095603
Golden flower (diploid) 3
29.319
CNS0095604
Slightly white alabastrum(tetraploid) 1
19.447
CNS0095605
Slightly white alabastrum(tetraploid) 2
17.693
CNS0095606
Slightly white alabastrum(tetraploid) 3
30.791
CNS0095607
Whole white alabastrum(tetraploid) 1
19.887
CNS0095608
Whole white alabastrum(tetraploid) 2
15.873
CNS0095609
Whole white alabastrum(tetraploid) 3
22.746
CNS0095610
Silvery flower (tetraploid) 1
26.409
CNS0095611
Silvery flower (tetraploid) 2
27.346
CNS0095612
Silvery flower (tetraploid) 3
26.786
CNS0095613
Golden flower (tetraploid) 1
16.219
CNS0095614
Golden flower (tetraploid) 2
24.862
CNS0095615
Golden flower (tetraploid) 3
25.374
CRA001975
CRR073297
Stem 1
30.419
CRR073298
Stem 2
28.951
CRR073299
Stem 3
22.157
CRR073300
Leaf 1
29.619
CRR073301
Leaf 2
27.758
CRR073302
Leaf 3
17.209
CRR073303
Juvenile bud 1
20.362
CRR073304
Juvenile bud 2
14.137
CRR073305
Juvenile bud 3
23.663
CRR073306
Third green 1
14.383
CRR073307
Third green 2
11.603
CRR073308
Third green 3
16.044
CRR073309
Second white 1
11.891
CRR073310
Second white 2
18.204
CRR073311
Second white 3
22.399
CRR073312
Silver flowering 1
14.805
CRR073313
Silver flowering 2
13.812
CRR073314
Silver flowering 3
14.685
CRR073315
Gold flowering 1
6.619
CRR073316
Gold flowering 2
12.084
CRR073317
Gold flowering 3
5.064
CRR073318
Tawny withering 1
21.525
CRR073319
Tawny withering 2
18.834
CRR073320
Tawny withering 3
19.839