Gene detail

Detail information of GWHGAAZE030600

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011071758.1	0	PREDICTED: ent-kaurenoic acid oxidase 2-like [Sesamum indicum]
COG	YP_001867927.1	2E-57	cytochrome P450
Swissprot	tr\|B5BSX1\|BAMO_GLYUR	3E-82	Beta-amyrin 11-oxidase
trEMBL	tr\|A0A022R835\|A0A022R835_ERYGU	0	Uncharacterized protein {ECO:0000313\|EMBL:EYU35888.1}
TAIR10	AT1G05160.1	2E-65	cytochrome P450, family 88, subfamily A, polypeptide 3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	45939880	45943443	+
GWHAAZE00000009	mRNA	45939880	45943443	+
GWHAAZE00000009	exon	45939880	45940112	+
GWHAAZE00000009	exon	45940892	45941216	+
GWHAAZE00000009	exon	45941370	45941456	+
GWHAAZE00000009	exon	45942088	45942342	+
GWHAAZE00000009	exon	45942422	45942505	+
GWHAAZE00000009	exon	45942658	45942736	+
GWHAAZE00000009	exon	45942847	45942953	+
GWHAAZE00000009	exon	45943117	45943235	+
GWHAAZE00000009	exon	45943353	45943443	+
GWHAAZE00000009	CDS	45939880	45940112	+
GWHAAZE00000009	CDS	45940892	45941216	+
GWHAAZE00000009	CDS	45941370	45941456	+
GWHAAZE00000009	CDS	45942088	45942342	+
GWHAAZE00000009	CDS	45942422	45942505	+
GWHAAZE00000009	CDS	45942658	45942736	+
GWHAAZE00000009	CDS	45942847	45942953	+
GWHAAZE00000009	CDS	45943117	45943235	+
GWHAAZE00000009	CDS	45943353	45943443	+

Transcript Sequence
>GWHTAAZE030634 ATGGAAGTTGTGTGGGTGAGTTTAGTATTAGGTGTTGTGCCAGTGGTTGGGTGGGTGTTGTGGTGGTGGAATTATCTCCGGTATGCTCTCCCTTACAAACTTGGTGGTTCCGCCACCACCCAGCTTCCACCGGGCCACATGGGTCTTCCCATTTTGGGAGAGATGCCTAATTTCCTTTGGTACTTTAAGTTTCTTCGCCGCCCTGATGACTACATTAATTCTAAGCGCCTCAAATATGGTGATGGTGTGGGATTGTATAGAACCCACCTCTTTGGATCACCAGCCATCATAGCATGCTCCCCAGCAGTCATCAAATTTGTATTCCAATCTGACGCTAACTTCATAATGGAATGGCCCGCCATTGAAATTGTGGGAAGCAGTTCCATGGTAACTGTTCAAGGTACAGCACATACCAGGCTCCGAAGCTTCGTCTTAAGGGCCATTAACCAACCTGATGCTCTCCGTAAGATCGCTCCTGTGTTCCAACCCCGGGTAATCGCTGCCCTCAAATCATGGGCAGAGAAGGGCCGAGTTATAGGATTCAAGGAATCTAAGAAGGTAACATTTGAGAACATAGGCAATTTTTTTGCGGGGTTTCAGCCTGGGCCAGTTCTTGATGCCCTTGATGAGTTATTTGCAGGGATGAGCCGAAAGAAAGCAGTGGCAATTTTTAGAGAACAGCTAGAGAAGAGGAAAAGAAATGACAATGATTCTGATAAGAAGGATCTAATGGATGGGCTTATACAACTAAGGGATGAGGAAGGAAAGCAATTAAGTGATTCTGAGGTGCTTGATAACATTGTTAGCCTTGTTGTGGCTGGCTATGAAACCACTTCCTTAGCAAAAACTTGGGCTCTGTATTATCTTGCTAAATACCCTGATGTTCTACAAAAGCTTCGGGATGAAAACATGCCTCTTAAGGATAAGAAGAACGGGGAACTGATCACGACTGACGAAATTGCAAAGCTGAAATACACAAACATGGTGGTGGAAGAAACAATAAGACTGGCTAATATAGCTGCCATTGTTTTTCGAACAGCTACCAAAGATGTTGACTACAAAGGTTATAAAATACCCAAAGGATGGAAAGTGATACTTTGGGTTAGATACCTCCACACAAGTCCGGAGAACTTTGACAATCCAATGTGTTTTAATCCTGATAGATGGAATGAGCCTGCGAAGCCTGGATCGTACCAAGTATTTGGTGGGGGATCAAGAATTTGTGTTGGAAATATGCTTGCTCGCATGCAACTTGCCATTTTTCTTCATTATCTGGCAACCGGATACAAGTGGGAATTGATGAATCCAAATGCGGAAATAAGTTATCTTTCTCATCCAAAACCAGCAGATGGGGTTGAGATTGTCTTCAGCAGACTTTAA

Network for GWHGAAZE030600

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	218	435	1.10E-54

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	36.051
	SRR3591706	second leaf	7.846
	SRR3591707	mature leaf	6.068
	SRR3591708	Shoot apex	9.023
	SRR3591709	Stem	33.884
	SRR3591710	White floral bud	22.601
	SRR3591711	White flower	24.666
	SRR3591712	Green floral bud	16.088
	SRR3591713	Yellow flower	7.831
SRP173429	SRR8316895	Juvenile bud stage	3.566
	SRR8316896	Juvenile bud stage	7.158
	SRR8316897	Juvenile bud stage	2.515
	SRR8316894	Third green stage	3.124
	SRR8316900	Third green stage	5.817
	SRR8316901	Third green stage	7.257
	SRR8316898	Complete white stage	4.115
	SRR8316899	Complete white stage	18.808
	SRR8316903	Complete white stage	7.449
	SRR8316902	Silver flowering stage	5.218
	SRR8316904	Silver flowering stage	7.447
	SRR8316905	Silver flowering stage	5.582
	SRR8316906	Gold flowering stage	7.933
	SRR8316907	Gold flowering stage	6.754
	SRR8316908	Gold flowering stage	23.154
SRP132670	SRR6706286	Control	6.940
	SRR6706287	Light intensity 50%	8.320
	SRR6706288	Light intensity 20%	10.848
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	6.683
	CNS0095593	Slightly white alabastrum(diploid) 2	7.103
	CNS0095594	Slightly white alabastrum(diploid) 3	5.736
	CNS0095595	Whole white alabastrum(diploid) 2	8.299
	CNS0095596	Whole white alabastrum(diploid) 3	6.451
	CNS0095597	Whole white alabastrum(diploid) 4	10.726
	CNS0095598	Silvery flower (diploied) 1	8.866
	CNS0095599	Silvery flower (diploied) 2	6.244
	CNS0095600	Silvery flower (diploied) 3	5.052
	CNS0095601	Golden flower (diploid) 1	6.884
	CNS0095602	Golden flower (diploid) 2	5.185
	CNS0095603	Golden flower (diploid) 3	4.584
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.951
	CNS0095605	Slightly white alabastrum(tetraploid) 2	7.903
	CNS0095606	Slightly white alabastrum(tetraploid) 3	8.921
	CNS0095607	Whole white alabastrum(tetraploid) 1	10.304
	CNS0095608	Whole white alabastrum(tetraploid) 2	9.888
	CNS0095609	Whole white alabastrum(tetraploid) 3	7.961
	CNS0095610	Silvery flower (tetraploid) 1	3.144
	CNS0095611	Silvery flower (tetraploid) 2	2.414
	CNS0095612	Silvery flower (tetraploid) 3	3.314
	CNS0095613	Golden flower (tetraploid) 1	0.767
	CNS0095614	Golden flower (tetraploid) 2	1.960
	CNS0095615	Golden flower (tetraploid) 3	1.221
CRA001975	CRR073297	Stem 1	5.107
	CRR073298	Stem 2	4.710
	CRR073299	Stem 3	3.612
	CRR073300	Leaf 1	10.186
	CRR073301	Leaf 2	7.046
	CRR073302	Leaf 3	5.105
	CRR073303	Juvenile bud 1	14.755
	CRR073304	Juvenile bud 2	13.375
	CRR073305	Juvenile bud 3	16.342
	CRR073306	Third green 1	11.380
	CRR073307	Third green 2	18.295
	CRR073308	Third green 3	12.006
	CRR073309	Second white 1	2.341
	CRR073310	Second white 2	1.479
	CRR073311	Second white 3	2.183
	CRR073312	Silver flowering 1	0.956
	CRR073313	Silver flowering 2	1.119
	CRR073314	Silver flowering 3	1.026
	CRR073315	Gold flowering 1	0.934
	CRR073316	Gold flowering 2	2.680
	CRR073317	Gold flowering 3	1.990
	CRR073318	Tawny withering 1	7.461
	CRR073319	Tawny withering 2	5.515
	CRR073320	Tawny withering 3	5.366