Detail information of GWHGAAZE030621


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002268569.16.1324E-161PREDICTED: transcription factor TCP15 [Vitis vinifera]
Swissprottr|Q9C9L2|TCP15_ARATH2E-65Transcription factor TCP15
trEMBLtr|F6GT89|F6GT89_VITVI5E-161Putative uncharacterized protein {ECO:0000313|EMBL:CCB43098.1}
TAIR10AT3G47620.16E-46TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4623977546240839-
GWHAAZE00000009mRNA4623977546240839-
GWHAAZE00000009exon4623977546240839-
GWHAAZE00000009CDS4623977546240839-
Transcript Sequence

Network for GWHGAAZE030621

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP542165.70E-40
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.633
SRR3591706second leaf7.276
SRR3591707mature leaf2.567
SRR3591708Shoot apex26.064
SRR3591709Stem9.432
SRR3591710White floral bud1.218
SRR3591711White flower4.776
SRR3591712Green floral bud2.657
SRR3591713Yellow flower0.431
SRP173429 SRR8316895Juvenile bud stage 4.417
SRR8316896Juvenile bud stage 4.163
SRR8316897Juvenile bud stage 0.851
SRR8316894Third green stage 0.776
SRR8316900Third green stage 1.253
SRR8316901Third green stage 1.131
SRR8316898Complete white stage 0.091
SRR8316899Complete white stage 4.880
SRR8316903Complete white stage 0.490
SRR8316902Silver flowering stage1.199
SRR8316904Silver flowering stage0.992
SRR8316905Silver flowering stage0.116
SRR8316906Gold flowering stage 0.498
SRR8316907Gold flowering stage 0.522
SRR8316908Gold flowering stage 1.596
SRP132670SRR6706286Control3.767
SRR6706287Light intensity 50%3.156
SRR6706288Light intensity 20%3.221
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.673
CNS0095593Slightly white alabastrum(diploid) 25.539
CNS0095594Slightly white alabastrum(diploid) 31.964
CNS0095595Whole white alabastrum(diploid) 23.829
CNS0095596Whole white alabastrum(diploid) 34.224
CNS0095597Whole white alabastrum(diploid) 41.978
CNS0095598Silvery flower (diploied) 12.742
CNS0095599Silvery flower (diploied) 21.165
CNS0095600Silvery flower (diploied) 31.601
CNS0095601Golden flower (diploid) 11.619
CNS0095602Golden flower (diploid) 22.048
CNS0095603Golden flower (diploid) 32.170
CNS0095604Slightly white alabastrum(tetraploid) 15.008
CNS0095605Slightly white alabastrum(tetraploid) 25.174
CNS0095606Slightly white alabastrum(tetraploid) 39.638
CNS0095607Whole white alabastrum(tetraploid) 11.557
CNS0095608Whole white alabastrum(tetraploid) 21.670
CNS0095609Whole white alabastrum(tetraploid) 32.908
CNS0095610Silvery flower (tetraploid) 13.309
CNS0095611Silvery flower (tetraploid) 21.505
CNS0095612Silvery flower (tetraploid) 30.984
CNS0095613Golden flower (tetraploid) 10.317
CNS0095614Golden flower (tetraploid) 21.482
CNS0095615Golden flower (tetraploid) 30.642
CRA001975CRR073297Stem 114.593
CRR073298Stem 211.181
CRR073299Stem 318.989
CRR073300Leaf 14.656
CRR073301Leaf 25.433
CRR073302Leaf 34.749
CRR073303Juvenile bud 16.189
CRR073304Juvenile bud 21.281
CRR073305Juvenile bud 38.212
CRR073306Third green 10.434
CRR073307Third green 21.966
CRR073308Third green 31.928
CRR073309Second white 10.436
CRR073310Second white 20.273
CRR073311Second white 30.895
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.234
CRR073314Silver flowering 30.284
CRR073315Gold flowering 16.158
CRR073316Gold flowering 25.816
CRR073317Gold flowering 38.908
CRR073318Tawny withering 114.886
CRR073319Tawny withering 27.084
CRR073320Tawny withering 314.084