Gene detail

Detail information of GWHGAAZE030628

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007209276.1	3.1845E-132	hypothetical protein PRUPE_ppa007562mg [Prunus persica]
Swissprot	tr\|P81392\|MYB06_ANTMA	3E-118	Myb-related protein 306
trEMBL	tr\|F6GT80\|F6GT80_VITVI	1E-132	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB43089.1}
TAIR10	AT5G62470.2	3E-82	myb domain protein 96

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	46388993	46390640	+
GWHAAZE00000009	mRNA	46388993	46390640	+
GWHAAZE00000009	exon	46388993	46389125	+
GWHAAZE00000009	exon	46389411	46389540	+
GWHAAZE00000009	exon	46389923	46390640	+
GWHAAZE00000009	CDS	46388993	46389125	+
GWHAAZE00000009	CDS	46389411	46389540	+
GWHAAZE00000009	CDS	46389923	46390640	+

Transcript Sequence
>GWHTAAZE030662 ATGGGAAGACCACCATGTTGTGAGAAGGTAGGAGTGAAGAAAGGACCATGGACACCCGAAGAGGATATCATTTTGGTCTCATACATTCAAGAACATGGTCCAGGCAACTGGAGATCTGTTCCTACTAATAGTGGTTTGTTGAGATGCAGCAAGAGTTGCAGGCTTAGATGGACGAACTATCTCCGACCTGGCATCAGACGTGGTAACTTCACTGACCATGAAGAGAAGATGATTATCCATCTCCAAGCTCTTCTCGGTAACAGATGGGCAGCCATAGCTTCGTACCTTCCTCAGAGAACAGACAATGATATAAAGAATTACTGGAATACCCATCTCAAAAAGAAACTACGAAAGCTTCAAGGGAATGATGAGCATGATGACCAAGGTGGACACTCAATATCTGAATCAGTAATCTCCAAGGGTCAATGGGAGAGAAGGCTTCAAACAGATATCCACATGGCCAAACAAGCCCTATGCGAAGCCTTGTCACTTGACAAATCTACCCCTACTCTTTTTCCAAACACAAAGCCCCTGATGATCAATGGCCTTAATCTCCCTCAAAAATCTGAATCACAAATCCAATCATCCACTCCATATGTCTCAAATACTGAGAATATAGCCCGATTGCTCGAGAATTGGACGAAAAACTCCCCGAAATCGTCTCGATCAAGCTCGGAAACCACTCAACTAAATTCTAGAAGAGGAGGAGGAGGTGGTTCTAGCCCTAGTGAAGGTACCCCCGCTGTGGAGGGTAGTTTGGACAATGCAGTGTTTGGTAGCTTGAATTCTGCCAATTCCAGTTCTGGTTCTGTTTCTCCAGGGACAACCCTATTCCAGGGTCAGATTAAGCCCTGTTCGGAAGCGGGTCAAATGCCTCTGACTATGCTAGAGAAATGGCTATTTGATGAAGTTGGTGGCGCACAAGTGCAAGATGAGCTAATTGACTTGTCATTTGGGGAAACTTCTGGTTTGTTTAATTAG

Network for GWHGAAZE030628

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.32	Myb_DNA-binding	14	61	1.70E-14
PF00249.32	Myb_DNA-binding	67	112	6.80E-13

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.022
	SRR3591706	second leaf	0.539
	SRR3591707	mature leaf	2.443
	SRR3591708	Shoot apex	1.287
	SRR3591709	Stem	0.692
	SRR3591710	White floral bud	1.644
	SRR3591711	White flower	4.921
	SRR3591712	Green floral bud	7.803
	SRR3591713	Yellow flower	1.077
SRP173429	SRR8316895	Juvenile bud stage	3.531
	SRR8316896	Juvenile bud stage	4.730
	SRR8316897	Juvenile bud stage	2.500
	SRR8316894	Third green stage	2.407
	SRR8316900	Third green stage	6.615
	SRR8316901	Third green stage	6.240
	SRR8316898	Complete white stage	0.336
	SRR8316899	Complete white stage	3.573
	SRR8316903	Complete white stage	1.055
	SRR8316902	Silver flowering stage	2.295
	SRR8316904	Silver flowering stage	1.677
	SRR8316905	Silver flowering stage	0.429
	SRR8316906	Gold flowering stage	2.029
	SRR8316907	Gold flowering stage	1.719
	SRR8316908	Gold flowering stage	2.771
SRP132670	SRR6706286	Control	2.201
	SRR6706287	Light intensity 50%	2.398
	SRR6706288	Light intensity 20%	3.444
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.317
	CNS0095593	Slightly white alabastrum(diploid) 2	0.982
	CNS0095594	Slightly white alabastrum(diploid) 3	3.514
	CNS0095595	Whole white alabastrum(diploid) 2	0.581
	CNS0095596	Whole white alabastrum(diploid) 3	0.830
	CNS0095597	Whole white alabastrum(diploid) 4	1.604
	CNS0095598	Silvery flower (diploied) 1	0.982
	CNS0095599	Silvery flower (diploied) 2	0.511
	CNS0095600	Silvery flower (diploied) 3	2.211
	CNS0095601	Golden flower (diploid) 1	0.081
	CNS0095602	Golden flower (diploid) 2	0.685
	CNS0095603	Golden flower (diploid) 3	0.619
	CNS0095604	Slightly white alabastrum(tetraploid) 1	8.546
	CNS0095605	Slightly white alabastrum(tetraploid) 2	7.251
	CNS0095606	Slightly white alabastrum(tetraploid) 3	17.731
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.455
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.412
	CNS0095609	Whole white alabastrum(tetraploid) 3	9.391
	CNS0095610	Silvery flower (tetraploid) 1	6.132
	CNS0095611	Silvery flower (tetraploid) 2	2.665
	CNS0095612	Silvery flower (tetraploid) 3	3.007
	CNS0095613	Golden flower (tetraploid) 1	1.415
	CNS0095614	Golden flower (tetraploid) 2	2.109
	CNS0095615	Golden flower (tetraploid) 3	1.580
CRA001975	CRR073297	Stem 1	8.098
	CRR073298	Stem 2	6.884
	CRR073299	Stem 3	4.095
	CRR073300	Leaf 1	6.742
	CRR073301	Leaf 2	7.940
	CRR073302	Leaf 3	2.872
	CRR073303	Juvenile bud 1	4.736
	CRR073304	Juvenile bud 2	3.300
	CRR073305	Juvenile bud 3	5.636
	CRR073306	Third green 1	1.343
	CRR073307	Third green 2	0.049
	CRR073308	Third green 3	1.502
	CRR073309	Second white 1	0.599
	CRR073310	Second white 2	1.214
	CRR073311	Second white 3	0.910
	CRR073312	Silver flowering 1	0.184
	CRR073313	Silver flowering 2	0.204
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	35.456
	CRR073316	Gold flowering 2	24.083
	CRR073317	Gold flowering 3	25.951
	CRR073318	Tawny withering 1	0.578
	CRR073319	Tawny withering 2	0.522
	CRR073320	Tawny withering 3	0.488