Detail information of GWHGAAZE030644


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP31279.14.24121E-59hypothetical protein JCGZ_11655 [Jatropha curcas]
Swissprottr|Q8LBA0|NIPL2_ARATH1E-53NEP1-interacting protein-like 2
trEMBLtr|A0A067KHI3|A0A067KHI3_JATCU2E-59Uncharacterized protein {ECO:0000313|EMBL:KDP31279.1}
TAIR10AT1G74410.15E-39RING/U-box superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4661931146622264-
GWHAAZE00000009mRNA4661931146622264-
GWHAAZE00000009exon4661931146619436-
GWHAAZE00000009exon4661951346619671-
GWHAAZE00000009exon4662009946620211-
GWHAAZE00000009exon4662043046620656-
GWHAAZE00000009exon4662210446622264-
GWHAAZE00000009CDS4662210446622264-
GWHAAZE00000009CDS4662043046620656-
GWHAAZE00000009CDS4662009946620211-
GWHAAZE00000009CDS4661951346619671-
GWHAAZE00000009CDS4661931146619436-
Transcript Sequence

Network for GWHGAAZE030644

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13639.7zf-RING_22142576.70E-09
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.349
SRR3591706second leaf6.343
SRR3591707mature leaf10.950
SRR3591708Shoot apex7.370
SRR3591709Stem17.328
SRR3591710White floral bud9.491
SRR3591711White flower8.886
SRR3591712Green floral bud7.416
SRR3591713Yellow flower6.144
SRP173429 SRR8316895Juvenile bud stage 7.608
SRR8316896Juvenile bud stage 8.814
SRR8316897Juvenile bud stage 4.824
SRR8316894Third green stage 2.907
SRR8316900Third green stage 9.880
SRR8316901Third green stage 9.607
SRR8316898Complete white stage 9.496
SRR8316899Complete white stage 26.980
SRR8316903Complete white stage 11.295
SRR8316902Silver flowering stage8.331
SRR8316904Silver flowering stage10.799
SRR8316905Silver flowering stage4.161
SRR8316906Gold flowering stage 15.859
SRR8316907Gold flowering stage 15.237
SRR8316908Gold flowering stage 15.231
SRP132670SRR6706286Control7.728
SRR6706287Light intensity 50%7.658
SRR6706288Light intensity 20%8.519
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.280
CNS0095593Slightly white alabastrum(diploid) 212.425
CNS0095594Slightly white alabastrum(diploid) 39.443
CNS0095595Whole white alabastrum(diploid) 29.790
CNS0095596Whole white alabastrum(diploid) 35.856
CNS0095597Whole white alabastrum(diploid) 49.312
CNS0095598Silvery flower (diploied) 117.784
CNS0095599Silvery flower (diploied) 211.853
CNS0095600Silvery flower (diploied) 321.360
CNS0095601Golden flower (diploid) 114.103
CNS0095602Golden flower (diploid) 217.736
CNS0095603Golden flower (diploid) 317.287
CNS0095604Slightly white alabastrum(tetraploid) 16.911
CNS0095605Slightly white alabastrum(tetraploid) 26.284
CNS0095606Slightly white alabastrum(tetraploid) 310.076
CNS0095607Whole white alabastrum(tetraploid) 14.192
CNS0095608Whole white alabastrum(tetraploid) 24.592
CNS0095609Whole white alabastrum(tetraploid) 37.715
CNS0095610Silvery flower (tetraploid) 119.161
CNS0095611Silvery flower (tetraploid) 218.412
CNS0095612Silvery flower (tetraploid) 315.093
CNS0095613Golden flower (tetraploid) 116.092
CNS0095614Golden flower (tetraploid) 218.666
CNS0095615Golden flower (tetraploid) 320.224
CRA001975CRR073297Stem 110.547
CRR073298Stem 212.510
CRR073299Stem 39.773
CRR073300Leaf 113.438
CRR073301Leaf 213.579
CRR073302Leaf 311.267
CRR073303Juvenile bud 18.754
CRR073304Juvenile bud 26.575
CRR073305Juvenile bud 38.971
CRR073306Third green 14.297
CRR073307Third green 23.326
CRR073308Third green 33.398
CRR073309Second white 13.167
CRR073310Second white 25.033
CRR073311Second white 34.219
CRR073312Silver flowering 12.110
CRR073313Silver flowering 22.162
CRR073314Silver flowering 32.541
CRR073315Gold flowering 19.822
CRR073316Gold flowering 29.369
CRR073317Gold flowering 36.488
CRR073318Tawny withering 16.814
CRR073319Tawny withering 25.565
CRR073320Tawny withering 37.935