Detail information of GWHGAAZE030688


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP15082.10unnamed protein product [Coffea canephora]
Swissprottr|Q9FMK7|BT1_ARATH7E-137BTB/POZ and TAZ domain-containing protein 1
trEMBLtr|A0A068V3E2|A0A068V3E2_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_94 {ECO:0000313|EMBL:CDP15082.1}
TAIR10AT5G63160.14E-108BTB and TAZ domain protein 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4724498247248591-
GWHAAZE00000009mRNA4724498247248591-
GWHAAZE00000009exon4724498247245162-
GWHAAZE00000009exon4724667947246989-
GWHAAZE00000009exon4724723547247538-
GWHAAZE00000009exon4724795047248083-
GWHAAZE00000009exon4724844547248591-
GWHAAZE00000009CDS4724844547248591-
GWHAAZE00000009CDS4724795047248083-
GWHAAZE00000009CDS4724723547247538-
GWHAAZE00000009CDS4724667947246989-
GWHAAZE00000009CDS4724498247245162-
Transcript Sequence

Network for GWHGAAZE030688

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.32BTB301281.40E-10
PF02135.17zf-TAZ2122981.80E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTAZ
Ubiquitin Family3-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0005634cellular_componentnucleus
GO:0003712molecular_functiontranscription coregulator activity
GO:0004402molecular_functionhistone acetyltransferase activity
GO:0008270molecular_functionzinc ion binding
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf81.577
SRR3591706second leaf47.157
SRR3591707mature leaf196.520
SRR3591708Shoot apex91.730
SRR3591709Stem90.286
SRR3591710White floral bud43.034
SRR3591711White flower64.832
SRR3591712Green floral bud30.224
SRR3591713Yellow flower115.457
SRP173429 SRR8316895Juvenile bud stage 12.820
SRR8316896Juvenile bud stage 17.060
SRR8316897Juvenile bud stage 16.643
SRR8316894Third green stage 5.074
SRR8316900Third green stage 12.470
SRR8316901Third green stage 18.031
SRR8316898Complete white stage 13.545
SRR8316899Complete white stage 43.286
SRR8316903Complete white stage 27.096
SRR8316902Silver flowering stage17.396
SRR8316904Silver flowering stage24.200
SRR8316905Silver flowering stage20.204
SRR8316906Gold flowering stage 41.209
SRR8316907Gold flowering stage 27.934
SRR8316908Gold flowering stage 43.630
SRP132670SRR6706286Control14.305
SRR6706287Light intensity 50%15.776
SRR6706288Light intensity 20%14.510
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.889
CNS0095593Slightly white alabastrum(diploid) 245.553
CNS0095594Slightly white alabastrum(diploid) 347.677
CNS0095595Whole white alabastrum(diploid) 228.978
CNS0095596Whole white alabastrum(diploid) 313.927
CNS0095597Whole white alabastrum(diploid) 424.166
CNS0095598Silvery flower (diploied) 169.711
CNS0095599Silvery flower (diploied) 251.212
CNS0095600Silvery flower (diploied) 382.552
CNS0095601Golden flower (diploid) 184.302
CNS0095602Golden flower (diploid) 2112.850
CNS0095603Golden flower (diploid) 3118.541
CNS0095604Slightly white alabastrum(tetraploid) 15.448
CNS0095605Slightly white alabastrum(tetraploid) 25.844
CNS0095606Slightly white alabastrum(tetraploid) 312.474
CNS0095607Whole white alabastrum(tetraploid) 19.612
CNS0095608Whole white alabastrum(tetraploid) 25.311
CNS0095609Whole white alabastrum(tetraploid) 35.659
CNS0095610Silvery flower (tetraploid) 169.965
CNS0095611Silvery flower (tetraploid) 278.591
CNS0095612Silvery flower (tetraploid) 374.652
CNS0095613Golden flower (tetraploid) 173.743
CNS0095614Golden flower (tetraploid) 272.582
CNS0095615Golden flower (tetraploid) 3314.835
CRA001975CRR073297Stem 147.002
CRR073298Stem 238.050
CRR073299Stem 347.523
CRR073300Leaf 159.984
CRR073301Leaf 259.613
CRR073302Leaf 356.204
CRR073303Juvenile bud 141.153
CRR073304Juvenile bud 280.782
CRR073305Juvenile bud 361.019
CRR073306Third green 119.427
CRR073307Third green 244.457
CRR073308Third green 334.580
CRR073309Second white 19.714
CRR073310Second white 216.207
CRR073311Second white 320.797
CRR073312Silver flowering 1126.667
CRR073313Silver flowering 2168.994
CRR073314Silver flowering 3216.362
CRR073315Gold flowering 164.488
CRR073316Gold flowering 260.260
CRR073317Gold flowering 339.265
CRR073318Tawny withering 176.580
CRR073319Tawny withering 2129.800
CRR073320Tawny withering 390.891