Detail information of GWHGAAZE030691


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008794647.10PREDICTED: adenosylhomocysteinase-like [Phoenix dactylifera]
COGYP_003396398.10adenosylhomocysteinase
Swissprottr|Q01781|SAHH_PETCR0Adenosylhomocysteinase
trEMBLtr|D7MH99|D7MH99_ARALL0Adenosylhomocysteinase {ECO:0000256|RuleBase:RU000548}
TAIR10AT4G13940.10S-adenosyl-L-homocysteine hydrolase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4729964547301725+
GWHAAZE00000009mRNA4729964547301725+
GWHAAZE00000009exon4729964547300355+
GWHAAZE00000009exon4730097947301725+
GWHAAZE00000009CDS4729964547300355+
GWHAAZE00000009CDS4730097947301725+
Transcript Sequence

Network for GWHGAAZE030691

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05221.18AdoHcyase134848.00E-144
PF00670.22AdoHcyase_NAD2404031.20E-82
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01251E3.3.1.1, ahcY Metabolic pathways map01100
Cysteine and methionine metabolismmap00270

Gene Ontology

GO term OntologyName
GO:0004013molecular_functionadenosylhomocysteinase activity

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE030691.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30100200300400500600700800Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf299.936
SRR3591706second leaf157.915
SRR3591707mature leaf154.454
SRR3591708Shoot apex419.599
SRR3591709Stem357.000
SRR3591710White floral bud244.986
SRR3591711White flower191.921
SRR3591712Green floral bud590.336
SRR3591713Yellow flower106.096
SRP173429 SRR8316895Juvenile bud stage 211.067
SRR8316896Juvenile bud stage 239.282
SRR8316897Juvenile bud stage 112.769
SRR8316894Third green stage 101.009
SRR8316900Third green stage 466.156
SRR8316901Third green stage 404.102
SRR8316898Complete white stage 101.629
SRR8316899Complete white stage 453.840
SRR8316903Complete white stage 132.811
SRR8316902Silver flowering stage70.026
SRR8316904Silver flowering stage81.389
SRR8316905Silver flowering stage38.092
SRR8316906Gold flowering stage 120.893
SRR8316907Gold flowering stage 147.955
SRR8316908Gold flowering stage 203.660
SRP132670SRR6706286Control430.952
SRR6706287Light intensity 50%450.403
SRR6706288Light intensity 20%503.155
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1273.283
CNS0095593Slightly white alabastrum(diploid) 2329.184
CNS0095594Slightly white alabastrum(diploid) 3213.245
CNS0095595Whole white alabastrum(diploid) 2341.848
CNS0095596Whole white alabastrum(diploid) 3376.463
CNS0095597Whole white alabastrum(diploid) 4297.247
CNS0095598Silvery flower (diploied) 1221.794
CNS0095599Silvery flower (diploied) 2187.236
CNS0095600Silvery flower (diploied) 3241.637
CNS0095601Golden flower (diploid) 1164.797
CNS0095602Golden flower (diploid) 2199.786
CNS0095603Golden flower (diploid) 3195.414
CNS0095604Slightly white alabastrum(tetraploid) 1369.146
CNS0095605Slightly white alabastrum(tetraploid) 2300.444
CNS0095606Slightly white alabastrum(tetraploid) 3576.197
CNS0095607Whole white alabastrum(tetraploid) 1208.238
CNS0095608Whole white alabastrum(tetraploid) 2202.869
CNS0095609Whole white alabastrum(tetraploid) 3514.569
CNS0095610Silvery flower (tetraploid) 1251.007
CNS0095611Silvery flower (tetraploid) 2276.188
CNS0095612Silvery flower (tetraploid) 3197.674
CNS0095613Golden flower (tetraploid) 1116.438
CNS0095614Golden flower (tetraploid) 2211.362
CNS0095615Golden flower (tetraploid) 391.765
CRA001975CRR073297Stem 1375.938
CRR073298Stem 2401.845
CRR073299Stem 3593.132
CRR073300Leaf 1440.108
CRR073301Leaf 2469.399
CRR073302Leaf 3735.931
CRR073303Juvenile bud 1609.520
CRR073304Juvenile bud 2493.906
CRR073305Juvenile bud 3659.286
CRR073306Third green 1101.513
CRR073307Third green 2102.228
CRR073308Third green 395.670
CRR073309Second white 1142.223
CRR073310Second white 275.028
CRR073311Second white 359.928
CRR073312Silver flowering 178.768
CRR073313Silver flowering 2128.501
CRR073314Silver flowering 3108.673
CRR073315Gold flowering 183.863
CRR073316Gold flowering 2102.319
CRR073317Gold flowering 3137.722
CRR073318Tawny withering 1413.336
CRR073319Tawny withering 2282.416
CRR073320Tawny withering 3439.777