Gene detail

Detail information of GWHGAAZE030742

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011073077.1	0	PREDICTED: exocyst complex component EXO70B1 [Sesamum indicum]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	1E-107	Exocyst complex component EXO70A1
trEMBL	tr\|F6GST9\|F6GST9_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB43324.1}
TAIR10	AT5G50380.1	2E-163	exocyst subunit exo70 family protein F1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	47855711	47857027	-
GWHAAZE00000009	mRNA	47855711	47857027	-
GWHAAZE00000009	exon	47855711	47857027	-
GWHAAZE00000009	CDS	47855711	47857027	-

Transcript Sequence
>GWHTAAZE030776 ATGATTAGGTCTGGGTATGAGAAGGAGTGCTGCCAGGTGTACAGCAGTGTACGCCGTGATGTTCTGGATGAGTGTATGTCGATTCTTGGTGTTGAGAAGCTCAGTATTGAGGAGGTTCAGAGGGTTGAGTGGAGAAAAATGGATGAGAAGATGAAGAAGTGGGTTCAAGCTATTCGTGTTGTGGTTAGGGTTCTTTTGTTAGGGGAGAAGCGGCTTTGTGAACAAATTTTTAGTGGGTCGGAATTGATAAAGGAGGTTTGTTTTGTGGAAACTGCAAAAGGATGTATTATGCAGCTGTTGAATTTTGGCGAGGCGGTTGTGGTTGGGAAGAGGTCGTCGGAGAAGCTCTTTTGTATACTGGACATGTATGATATGCTGGCTCATGTTTTGCCGGATTTGGAAGCGTTGTTCAATGATGAATCCGGGGAACTGGTTTGCAGTGACGCAAAGGGTGTGCTGACTGGACTGGGTGAGGCAGCAATTGGCACATTTGTGGAGTTTGAAAATGCTGTTCAGGGTGAATCATCAAAGAAACCAATACATGGTGGTGACATTCACCCGCTAACGCGATATGTAATGAATTATTCAAGATTGCTTGTGGATTACAGCGATACTCTAAATGGACTCTTAGGAAATACTACAGATGAATTTGATCATTCGCAAATTGATGATTTTGATACTCTGCAGTTAGAAAGAATGACTCCAATAGGAATCCGCTTGCTTTCATTAATCATGTGTCTACAATCGAACCTAGAGGAGAAGTCAAGATACTACGATGATAGTGCAATGCAATATATATTCCTGATGAACAATCTCCTTTACATAGTTCAGAAAGTAAAAGGCTCCGATCTTCAAAATCTTTTGGGAGACCAGTGGATTCGCAAACACCGTGGTCAAATTCGCCAATATTCCACAAGCTATCTTAGAGCTTCATGGAGCAAGGTCTTGACTTGTTTGAAGGATGAAGGGATAGGTGCAAGCACAAACAACGCCTCTAAGGCTGCTCTGAAGGAAAGGTTTAAGAATTTTAATGCATGTTTTGAAGATGTTTATATTACCCAGACAGCTTGGAAGGTCCCTGATCCTCAACTTCGCGAGGAGCTTCGAATATCCATATCTGAAAAAGTTCTTCCAGCATACCGCTCCTTTATGGGTAGGTTCCGGAGTCAACTAGAGGGTGGAAGGCATGCTGGAAAGTATATAAAGTACACTTCAGATGATTTGGAGCATTACATTGTGGACTTATTTGAAGGTTCACCAGCATCTCTGAACAACTTCAGGAGAAAAAGCTCGTCTCATAAGCTGCAGGACCACTAA

Network for GWHGAAZE030742

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	52	412	1.40E-124

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	27.183
	SRR3591706	second leaf	8.169
	SRR3591707	mature leaf	10.938
	SRR3591708	Shoot apex	13.663
	SRR3591709	Stem	28.030
	SRR3591710	White floral bud	46.725
	SRR3591711	White flower	34.142
	SRR3591712	Green floral bud	43.994
	SRR3591713	Yellow flower	25.358
SRP173429	SRR8316895	Juvenile bud stage	14.736
	SRR8316896	Juvenile bud stage	18.207
	SRR8316897	Juvenile bud stage	8.510
	SRR8316894	Third green stage	7.100
	SRR8316900	Third green stage	31.044
	SRR8316901	Third green stage	29.717
	SRR8316898	Complete white stage	6.502
	SRR8316899	Complete white stage	33.774
	SRR8316903	Complete white stage	13.046
	SRR8316902	Silver flowering stage	8.675
	SRR8316904	Silver flowering stage	12.816
	SRR8316905	Silver flowering stage	5.626
	SRR8316906	Gold flowering stage	23.733
	SRR8316907	Gold flowering stage	17.136
	SRR8316908	Gold flowering stage	15.333
SRP132670	SRR6706286	Control	16.334
	SRR6706287	Light intensity 50%	18.099
	SRR6706288	Light intensity 20%	16.089
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	18.171
	CNS0095593	Slightly white alabastrum(diploid) 2	21.901
	CNS0095594	Slightly white alabastrum(diploid) 3	24.672
	CNS0095595	Whole white alabastrum(diploid) 2	42.538
	CNS0095596	Whole white alabastrum(diploid) 3	43.558
	CNS0095597	Whole white alabastrum(diploid) 4	45.347
	CNS0095598	Silvery flower (diploied) 1	32.496
	CNS0095599	Silvery flower (diploied) 2	26.757
	CNS0095600	Silvery flower (diploied) 3	29.889
	CNS0095601	Golden flower (diploid) 1	25.419
	CNS0095602	Golden flower (diploid) 2	30.442
	CNS0095603	Golden flower (diploid) 3	29.989
	CNS0095604	Slightly white alabastrum(tetraploid) 1	32.102
	CNS0095605	Slightly white alabastrum(tetraploid) 2	33.065
	CNS0095606	Slightly white alabastrum(tetraploid) 3	18.075
	CNS0095607	Whole white alabastrum(tetraploid) 1	50.902
	CNS0095608	Whole white alabastrum(tetraploid) 2	61.382
	CNS0095609	Whole white alabastrum(tetraploid) 3	39.888
	CNS0095610	Silvery flower (tetraploid) 1	24.904
	CNS0095611	Silvery flower (tetraploid) 2	20.855
	CNS0095612	Silvery flower (tetraploid) 3	26.424
	CNS0095613	Golden flower (tetraploid) 1	12.614
	CNS0095614	Golden flower (tetraploid) 2	19.455
	CNS0095615	Golden flower (tetraploid) 3	22.288
CRA001975	CRR073297	Stem 1	17.938
	CRR073298	Stem 2	18.442
	CRR073299	Stem 3	15.723
	CRR073300	Leaf 1	37.223
	CRR073301	Leaf 2	29.388
	CRR073302	Leaf 3	18.668
	CRR073303	Juvenile bud 1	25.077
	CRR073304	Juvenile bud 2	25.178
	CRR073305	Juvenile bud 3	40.151
	CRR073306	Third green 1	18.898
	CRR073307	Third green 2	22.761
	CRR073308	Third green 3	21.383
	CRR073309	Second white 1	23.826
	CRR073310	Second white 2	24.992
	CRR073311	Second white 3	24.732
	CRR073312	Silver flowering 1	34.399
	CRR073313	Silver flowering 2	39.798
	CRR073314	Silver flowering 3	28.116
	CRR073315	Gold flowering 1	14.525
	CRR073316	Gold flowering 2	16.313
	CRR073317	Gold flowering 3	18.426
	CRR073318	Tawny withering 1	19.956
	CRR073319	Tawny withering 2	15.992
	CRR073320	Tawny withering 3	18.675