Detail information of GWHGAAZE030771


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006436889.11.66981E-42hypothetical protein CICLE_v10033363mg [Citrus clementina]
Swissprottr|P32295|ARG7_VIGRR2E-13Indole-3-acetic acid-induced protein ARG7
trEMBLtr|V4VCR9|V4VCR9_9ROSI6E-43Uncharacterized protein {ECO:0000313|EMBL:ESR50129.1}
TAIR10AT5G50760.11E-20SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4818442748184900-
GWHAAZE00000009mRNA4818442748184900-
GWHAAZE00000009exon4818442748184900-
GWHAAZE00000009CDS4818442748184900-
Transcript Sequence

Network for GWHGAAZE030771

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible351094.20E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.104
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem2.355
SRR3591710White floral bud1.720
SRR3591711White flower0.674
SRR3591712Green floral bud28.722
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 4.087
SRR8316897Juvenile bud stage 0.509
SRR8316894Third green stage 1.340
SRR8316900Third green stage 1.067
SRR8316901Third green stage 1.318
SRR8316898Complete white stage 0.109
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.142
SRR8316906Gold flowering stage 0.233
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 1.046
SRP132670SRR6706286Control0.730
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.211
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.459
CNS0095593Slightly white alabastrum(diploid) 20.659
CNS0095594Slightly white alabastrum(diploid) 33.151
CNS0095595Whole white alabastrum(diploid) 20.144
CNS0095596Whole white alabastrum(diploid) 30.612
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.270
CNS0095602Golden flower (diploid) 20.079
CNS0095603Golden flower (diploid) 30.588
CNS0095604Slightly white alabastrum(tetraploid) 10.229
CNS0095605Slightly white alabastrum(tetraploid) 22.327
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.182
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.337
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.426
CNS0095613Golden flower (tetraploid) 11.188
CNS0095614Golden flower (tetraploid) 20.364
CNS0095615Golden flower (tetraploid) 30.397
CRA001975CRR073297Stem 10.972
CRR073298Stem 21.395
CRR073299Stem 30.460
CRR073300Leaf 10.000
CRR073301Leaf 20.137
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.200
CRR073313Silver flowering 20.000
CRR073314Silver flowering 31.179
CRR073315Gold flowering 10.344
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 11.528
CRR073319Tawny withering 27.697
CRR073320Tawny withering 33.639