Detail information of GWHGAAZE030814


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006341465.12.25776E-67PREDICTED: uncharacterized protein LOC102604677 [Solanum tuberosum]
COGYP_032238.10.000000001hypothetical protein BQ05830
trEMBLtr|M1B456|M1B456_SOLTU8E-68Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400036743}
TAIR10AT5G51040.11E-49Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4881392748816157-
GWHAAZE00000009mRNA4881392748816157-
GWHAAZE00000009exon4881603948816157-
GWHAAZE00000009exon4881553248815658-
GWHAAZE00000009exon4881417848814246-
GWHAAZE00000009exon4881392748814073-
GWHAAZE00000009CDS4881603948816157-
GWHAAZE00000009CDS4881553248815658-
GWHAAZE00000009CDS4881417848814246-
GWHAAZE00000009CDS4881392748814073-
Transcript Sequence

Network for GWHGAAZE030814

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0244


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03937.17Sdh5391075.10E-22
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf61.017
SRR3591706second leaf38.240
SRR3591707mature leaf35.580
SRR3591708Shoot apex66.685
SRR3591709Stem61.724
SRR3591710White floral bud82.127
SRR3591711White flower86.699
SRR3591712Green floral bud100.885
SRR3591713Yellow flower93.970
SRP173429 SRR8316895Juvenile bud stage 52.180
SRR8316896Juvenile bud stage 77.316
SRR8316897Juvenile bud stage 35.730
SRR8316894Third green stage 24.939
SRR8316900Third green stage 97.118
SRR8316901Third green stage 89.078
SRR8316898Complete white stage 28.293
SRR8316899Complete white stage 78.787
SRR8316903Complete white stage 51.400
SRR8316902Silver flowering stage34.598
SRR8316904Silver flowering stage34.086
SRR8316905Silver flowering stage20.621
SRR8316906Gold flowering stage 82.565
SRR8316907Gold flowering stage 75.737
SRR8316908Gold flowering stage 72.099
SRP132670SRR6706286Control94.392
SRR6706287Light intensity 50%91.906
SRR6706288Light intensity 20%92.415
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1104.478
CNS0095593Slightly white alabastrum(diploid) 293.302
CNS0095594Slightly white alabastrum(diploid) 3104.823
CNS0095595Whole white alabastrum(diploid) 2102.221
CNS0095596Whole white alabastrum(diploid) 3106.722
CNS0095597Whole white alabastrum(diploid) 479.600
CNS0095598Silvery flower (diploied) 189.549
CNS0095599Silvery flower (diploied) 283.097
CNS0095600Silvery flower (diploied) 371.777
CNS0095601Golden flower (diploid) 181.419
CNS0095602Golden flower (diploid) 264.925
CNS0095603Golden flower (diploid) 367.949
CNS0095604Slightly white alabastrum(tetraploid) 1110.866
CNS0095605Slightly white alabastrum(tetraploid) 2109.535
CNS0095606Slightly white alabastrum(tetraploid) 3104.018
CNS0095607Whole white alabastrum(tetraploid) 1107.057
CNS0095608Whole white alabastrum(tetraploid) 297.461
CNS0095609Whole white alabastrum(tetraploid) 3107.677
CNS0095610Silvery flower (tetraploid) 179.407
CNS0095611Silvery flower (tetraploid) 271.638
CNS0095612Silvery flower (tetraploid) 378.961
CNS0095613Golden flower (tetraploid) 186.547
CNS0095614Golden flower (tetraploid) 283.016
CNS0095615Golden flower (tetraploid) 360.299
CRA001975CRR073297Stem 160.995
CRR073298Stem 256.332
CRR073299Stem 357.334
CRR073300Leaf 154.711
CRR073301Leaf 266.672
CRR073302Leaf 360.352
CRR073303Juvenile bud 155.983
CRR073304Juvenile bud 255.281
CRR073305Juvenile bud 337.694
CRR073306Third green 133.818
CRR073307Third green 232.878
CRR073308Third green 329.972
CRR073309Second white 132.121
CRR073310Second white 230.703
CRR073311Second white 332.119
CRR073312Silver flowering 125.690
CRR073313Silver flowering 214.251
CRR073314Silver flowering 317.899
CRR073315Gold flowering 135.959
CRR073316Gold flowering 235.253
CRR073317Gold flowering 319.864
CRR073318Tawny withering 130.292
CRR073319Tawny withering 232.385
CRR073320Tawny withering 324.509