Detail information of GWHGAAZE030865


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010276726.10PREDICTED: plasma membrane ATPase 4-like [Nelumbo nucifera]
COGYP_005270382.10plasma-membrane proton-efflux P-type ATPase
Swissprottr|Q03194|PMA4_NICPL0Plasma membrane ATPase 4
trEMBLtr|A0A061GA14|A0A061GA14_THECC0H(+)-ATPase 9 {ECO:0000313|EMBL:EOY26002.1}
TAIR10AT1G80660.10H(+)-ATPase 9

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4957771549582073-
GWHAAZE00000009mRNA4957771549582073-
GWHAAZE00000009exon4957771549577811-
GWHAAZE00000009exon4957793149578112-
GWHAAZE00000009exon4957825149578433-
GWHAAZE00000009exon4957854249578715-
GWHAAZE00000009exon4957880149579315-
GWHAAZE00000009exon4957941649579725-
GWHAAZE00000009exon4957983149579935-
GWHAAZE00000009exon4958004049580162-
GWHAAZE00000009exon4958027149580390-
GWHAAZE00000009exon4958047749580803-
GWHAAZE00000009exon4958092749581379-
GWHAAZE00000009exon4958147449581572-
GWHAAZE00000009exon4958201749582073-
GWHAAZE00000009CDS4958201749582073-
GWHAAZE00000009CDS4958147449581572-
GWHAAZE00000009CDS4958092749581379-
GWHAAZE00000009CDS4958047749580803-
GWHAAZE00000009CDS4958027149580390-
GWHAAZE00000009CDS4958004049580162-
GWHAAZE00000009CDS4957983149579935-
GWHAAZE00000009CDS4957941649579725-
GWHAAZE00000009CDS4957880149579315-
GWHAAZE00000009CDS4957854249578715-
GWHAAZE00000009CDS4957825149578433-
GWHAAZE00000009CDS4957793149578112-
GWHAAZE00000009CDS4957771549577811-
Transcript Sequence

Network for GWHGAAZE030865

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00122.21E1-E2_ATPase942717.00E-48
PF00702.27Hydrolase2885656.20E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01535PMA1, PMA2 Metabolic pathways map01100
Oxidative phosphorylationmap00190

Gene Ontology

GO term OntologyName
GO:0120029biological_processproton export across plasma membrane
GO:0016021cellular_componentintegral component of membrane
GO:0008553molecular_functionproton-exporting ATPase activity, phosphorylative mechanism
GO:0000166molecular_functionnucleotide binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.826
SRR3591706second leaf0.025
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.299
SRR3591709Stem1.224
SRR3591710White floral bud6.471
SRR3591711White flower0.919
SRR3591712Green floral bud472.683
SRR3591713Yellow flower0.086
SRP173429 SRR8316895Juvenile bud stage 74.091
SRR8316896Juvenile bud stage 288.541
SRR8316897Juvenile bud stage 141.325
SRR8316894Third green stage 114.178
SRR8316900Third green stage 361.320
SRR8316901Third green stage 388.625
SRR8316898Complete white stage 0.166
SRR8316899Complete white stage 1.394
SRR8316903Complete white stage 0.361
SRR8316902Silver flowering stage0.033
SRR8316904Silver flowering stage0.128
SRR8316905Silver flowering stage0.040
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.073
SRP132670SRR6706286Control221.717
SRR6706287Light intensity 50%191.614
SRR6706288Light intensity 20%178.483
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1306.033
CNS0095593Slightly white alabastrum(diploid) 2223.261
CNS0095594Slightly white alabastrum(diploid) 3339.105
CNS0095595Whole white alabastrum(diploid) 2365.092
CNS0095596Whole white alabastrum(diploid) 3479.852
CNS0095597Whole white alabastrum(diploid) 4410.951
CNS0095598Silvery flower (diploied) 11.200
CNS0095599Silvery flower (diploied) 21.356
CNS0095600Silvery flower (diploied) 30.328
CNS0095601Golden flower (diploid) 10.717
CNS0095602Golden flower (diploid) 20.425
CNS0095603Golden flower (diploid) 30.640
CNS0095604Slightly white alabastrum(tetraploid) 1688.492
CNS0095605Slightly white alabastrum(tetraploid) 2709.554
CNS0095606Slightly white alabastrum(tetraploid) 30.877
CNS0095607Whole white alabastrum(tetraploid) 1991.583
CNS0095608Whole white alabastrum(tetraploid) 21036.022
CNS0095609Whole white alabastrum(tetraploid) 3638.906
CNS0095610Silvery flower (tetraploid) 10.886
CNS0095611Silvery flower (tetraploid) 20.262
CNS0095612Silvery flower (tetraploid) 31.647
CNS0095613Golden flower (tetraploid) 10.772
CNS0095614Golden flower (tetraploid) 20.577
CNS0095615Golden flower (tetraploid) 30.899
CRA001975CRR073297Stem 1140.833
CRR073298Stem 2172.058
CRR073299Stem 370.475
CRR073300Leaf 1393.440
CRR073301Leaf 2352.139
CRR073302Leaf 3194.355
CRR073303Juvenile bud 1215.063
CRR073304Juvenile bud 297.337
CRR073305Juvenile bud 30.437
CRR073306Third green 10.736
CRR073307Third green 20.825
CRR073308Third green 30.787
CRR073309Second white 10.158
CRR073310Second white 20.261
CRR073311Second white 30.328
CRR073312Silver flowering 11.877
CRR073313Silver flowering 21.080
CRR073314Silver flowering 30.360
CRR073315Gold flowering 11.069
CRR073316Gold flowering 20.089
CRR073317Gold flowering 30.443
CRR073318Tawny withering 10.351
CRR073319Tawny withering 20.785
CRR073320Tawny withering 30.973