Detail information of GWHGAAZE030881


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrNP_001289640.12.4761E-60calcineurin subunit B [Eucalyptus grandis]
trEMBLtr|Q93VF2|Q93VF2_EUCCA9E-61Calcineurin-like protein {ECO:0000313|EMBL:AAL25650.1}
TAIR10AT3G18430.24E-46Calcium-binding EF-hand family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4978059149781148-
GWHAAZE00000009mRNA4978059149781148-
GWHAAZE00000009exon4978059149780728-
GWHAAZE00000009exon4978085449780978-
GWHAAZE00000009exon4978107949781148-
GWHAAZE00000009CDS4978107949781148-
GWHAAZE00000009CDS4978085449780978-
GWHAAZE00000009CDS4978059149780728-
Transcript Sequence

Network for GWHGAAZE030881

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06268PPP3R, CNB MAPK signaling pathway map04010
Wnt signaling pathwaymap04310
VEGF signaling pathwaymap04370
Calcium signaling pathwaymap04020
cGMP-PKG signaling pathwaymap04022
Oocyte meiosismap04114
Cellular senescencemap04218
C-type lectin receptor signaling pathwaymap04625
Natural killer cell mediated cytotoxicitymap04650
T cell receptor signaling pathwaymap04660
Th1 and Th2 cell differentiationmap04658
Th17 cell differentiationmap04659
B cell receptor signaling pathwaymap04662
Glucagon signaling pathwaymap04922
Oxytocin signaling pathwaymap04921
Renin secretionmap04924
Glutamatergic synapsemap04724
Long-term potentiationmap04720
Axon guidancemap04360
Osteoclast differentiationmap04380

Gene Ontology

GO term OntologyName
GO:0005509molecular_functioncalcium ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf79.300
SRR3591706second leaf50.855
SRR3591707mature leaf58.419
SRR3591708Shoot apex59.985
SRR3591709Stem101.743
SRR3591710White floral bud69.861
SRR3591711White flower90.161
SRR3591712Green floral bud50.638
SRR3591713Yellow flower80.307
SRP173429 SRR8316895Juvenile bud stage 27.899
SRR8316896Juvenile bud stage 29.860
SRR8316897Juvenile bud stage 15.502
SRR8316894Third green stage 14.449
SRR8316900Third green stage 36.398
SRR8316901Third green stage 35.172
SRR8316898Complete white stage 19.644
SRR8316899Complete white stage 42.749
SRR8316903Complete white stage 26.800
SRR8316902Silver flowering stage20.679
SRR8316904Silver flowering stage37.626
SRR8316905Silver flowering stage19.612
SRR8316906Gold flowering stage 46.210
SRR8316907Gold flowering stage 47.166
SRR8316908Gold flowering stage 51.783
SRP132670SRR6706286Control8.849
SRR6706287Light intensity 50%7.269
SRR6706288Light intensity 20%8.039
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.850
CNS0095593Slightly white alabastrum(diploid) 227.368
CNS0095594Slightly white alabastrum(diploid) 334.182
CNS0095595Whole white alabastrum(diploid) 227.448
CNS0095596Whole white alabastrum(diploid) 336.530
CNS0095597Whole white alabastrum(diploid) 426.314
CNS0095598Silvery flower (diploied) 132.049
CNS0095599Silvery flower (diploied) 241.486
CNS0095600Silvery flower (diploied) 361.767
CNS0095601Golden flower (diploid) 134.519
CNS0095602Golden flower (diploid) 249.351
CNS0095603Golden flower (diploid) 349.007
CNS0095604Slightly white alabastrum(tetraploid) 141.046
CNS0095605Slightly white alabastrum(tetraploid) 240.469
CNS0095606Slightly white alabastrum(tetraploid) 331.240
CNS0095607Whole white alabastrum(tetraploid) 133.449
CNS0095608Whole white alabastrum(tetraploid) 221.679
CNS0095609Whole white alabastrum(tetraploid) 332.106
CNS0095610Silvery flower (tetraploid) 152.606
CNS0095611Silvery flower (tetraploid) 272.779
CNS0095612Silvery flower (tetraploid) 343.743
CNS0095613Golden flower (tetraploid) 128.429
CNS0095614Golden flower (tetraploid) 245.642
CNS0095615Golden flower (tetraploid) 328.966
CRA001975CRR073297Stem 17.327
CRR073298Stem 28.812
CRR073299Stem 34.221
CRR073300Leaf 17.060
CRR073301Leaf 27.744
CRR073302Leaf 35.585
CRR073303Juvenile bud 111.290
CRR073304Juvenile bud 25.975
CRR073305Juvenile bud 35.614
CRR073306Third green 15.723
CRR073307Third green 23.109
CRR073308Third green 33.980
CRR073309Second white 16.939
CRR073310Second white 27.387
CRR073311Second white 36.195
CRR073312Silver flowering 11.616
CRR073313Silver flowering 21.351
CRR073314Silver flowering 33.023
CRR073315Gold flowering 16.066
CRR073316Gold flowering 28.823
CRR073317Gold flowering 37.208
CRR073318Tawny withering 19.134
CRR073319Tawny withering 212.846
CRR073320Tawny withering 36.306