Detail information of GWHGAAZE030929


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010249884.13.90571E-91PREDICTED: auxin-responsive protein IAA1 [Nelumbo nucifera]
Swissprottr|P93830|IAA17_ARATH3E-63Auxin-responsive protein IAA17
trEMBLtr|B9RUW0|B9RUW0_RICCO2E-90Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIR10AT1G04250.19E-52AUX/IAA transcriptional regulator family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5053939750541451-
GWHAAZE00000009mRNA5053939750541451-
GWHAAZE00000009exon5054118350541451-
GWHAAZE00000009exon5054061150540795-
GWHAAZE00000009exon5054017450540285-
GWHAAZE00000009exon5053986950539930-
GWHAAZE00000009exon5053939750539717-
GWHAAZE00000009CDS5054118350541451-
GWHAAZE00000009CDS5054061150540795-
GWHAAZE00000009CDS5054017450540285-
GWHAAZE00000009CDS5053986950539930-
GWHAAZE00000009CDS5053967750539717-
GWHAAZE00000009three_prime_UTR5053939750539676-
Transcript Sequence

Network for GWHGAAZE030929

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.17AUX_IAA382125.30E-59
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf181.339
SRR3591706second leaf48.367
SRR3591707mature leaf45.303
SRR3591708Shoot apex40.165
SRR3591709Stem260.025
SRR3591710White floral bud79.716
SRR3591711White flower66.249
SRR3591712Green floral bud43.980
SRR3591713Yellow flower16.468
SRP173429 SRR8316895Juvenile bud stage 60.517
SRR8316896Juvenile bud stage 90.120
SRR8316897Juvenile bud stage 37.249
SRR8316894Third green stage 29.142
SRR8316900Third green stage 61.969
SRR8316901Third green stage 87.092
SRR8316898Complete white stage 49.188
SRR8316899Complete white stage 200.844
SRR8316903Complete white stage 64.931
SRR8316902Silver flowering stage39.344
SRR8316904Silver flowering stage47.306
SRR8316905Silver flowering stage26.261
SRR8316906Gold flowering stage 43.080
SRR8316907Gold flowering stage 26.667
SRR8316908Gold flowering stage 27.324
SRP132670SRR6706286Control61.199
SRR6706287Light intensity 50%65.378
SRR6706288Light intensity 20%67.078
CNP0000432CNS0095592Slightly white alabastrum(diploid) 169.366
CNS0095593Slightly white alabastrum(diploid) 299.739
CNS0095594Slightly white alabastrum(diploid) 385.007
CNS0095595Whole white alabastrum(diploid) 277.308
CNS0095596Whole white alabastrum(diploid) 338.856
CNS0095597Whole white alabastrum(diploid) 470.817
CNS0095598Silvery flower (diploied) 180.601
CNS0095599Silvery flower (diploied) 281.108
CNS0095600Silvery flower (diploied) 347.000
CNS0095601Golden flower (diploid) 167.422
CNS0095602Golden flower (diploid) 242.864
CNS0095603Golden flower (diploid) 341.258
CNS0095604Slightly white alabastrum(tetraploid) 139.956
CNS0095605Slightly white alabastrum(tetraploid) 232.162
CNS0095606Slightly white alabastrum(tetraploid) 361.638
CNS0095607Whole white alabastrum(tetraploid) 128.624
CNS0095608Whole white alabastrum(tetraploid) 234.463
CNS0095609Whole white alabastrum(tetraploid) 337.350
CNS0095610Silvery flower (tetraploid) 129.544
CNS0095611Silvery flower (tetraploid) 234.295
CNS0095612Silvery flower (tetraploid) 371.459
CNS0095613Golden flower (tetraploid) 18.676
CNS0095614Golden flower (tetraploid) 216.195
CNS0095615Golden flower (tetraploid) 36.490
CRA001975CRR073297Stem 163.839
CRR073298Stem 268.746
CRR073299Stem 355.124
CRR073300Leaf 1111.903
CRR073301Leaf 2125.322
CRR073302Leaf 3100.753
CRR073303Juvenile bud 1126.633
CRR073304Juvenile bud 287.102
CRR073305Juvenile bud 3115.704
CRR073306Third green 1180.960
CRR073307Third green 2210.651
CRR073308Third green 3161.479
CRR073309Second white 134.616
CRR073310Second white 252.926
CRR073311Second white 314.255
CRR073312Silver flowering 18.948
CRR073313Silver flowering 27.740
CRR073314Silver flowering 36.544
CRR073315Gold flowering 114.742
CRR073316Gold flowering 218.836
CRR073317Gold flowering 310.391
CRR073318Tawny withering 164.098
CRR073319Tawny withering 293.200
CRR073320Tawny withering 3108.639