Detail information of GWHGAAZE030942


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDO98063.10unnamed protein product [Coffea canephora]
COGYP_007802398.14E-67chaperone protein DnaK
Swissprottr|F4HQD4|HSP7P_ARATH0Heat shock 70 kDa protein 15
trEMBLtr|A0A068TRS5|A0A068TRS5_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_2 {ECO:0000313|EMBL:CDO98063.1}
TAIR10AT1G79920.10Heat shock protein 70 (Hsp 70) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5077998650785370-
GWHAAZE00000009mRNA5077998650785370-
GWHAAZE00000009exon5078420150785370-
GWHAAZE00000009exon5078380050784027-
GWHAAZE00000009exon5078361950783714-
GWHAAZE00000009exon5078330250783523-
GWHAAZE00000009exon5078136350781596-
GWHAAZE00000009exon5078116450781292-
GWHAAZE00000009exon5078093350781082-
GWHAAZE00000009exon5078055750780687-
GWHAAZE00000009exon5077998650780217-
GWHAAZE00000009CDS5078420150785370-
GWHAAZE00000009CDS5078380050784027-
GWHAAZE00000009CDS5078361950783714-
GWHAAZE00000009CDS5078330250783523-
GWHAAZE00000009CDS5078136350781596-
GWHAAZE00000009CDS5078116450781292-
GWHAAZE00000009CDS5078093350781082-
GWHAAZE00000009CDS5078055750780687-
GWHAAZE00000009CDS5077998650780217-
Transcript Sequence

Network for GWHGAAZE030942

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00012.21HSP7037021.30E-157
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09489HSPA4 Tight junction map04530
Antigen processing and presentationmap04612

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf101.897
SRR3591706second leaf55.068
SRR3591707mature leaf60.732
SRR3591708Shoot apex85.679
SRR3591709Stem58.320
SRR3591710White floral bud70.773
SRR3591711White flower60.636
SRR3591712Green floral bud95.297
SRR3591713Yellow flower39.146
SRP173429 SRR8316895Juvenile bud stage 102.614
SRR8316896Juvenile bud stage 223.970
SRR8316897Juvenile bud stage 92.901
SRR8316894Third green stage 58.946
SRR8316900Third green stage 186.596
SRR8316901Third green stage 176.605
SRR8316898Complete white stage 53.181
SRR8316899Complete white stage 171.483
SRR8316903Complete white stage 93.140
SRR8316902Silver flowering stage73.191
SRR8316904Silver flowering stage97.324
SRR8316905Silver flowering stage58.121
SRR8316906Gold flowering stage 171.825
SRR8316907Gold flowering stage 155.811
SRR8316908Gold flowering stage 132.973
SRP132670SRR6706286Control143.626
SRR6706287Light intensity 50%151.489
SRR6706288Light intensity 20%160.156
CNP0000432CNS0095592Slightly white alabastrum(diploid) 163.213
CNS0095593Slightly white alabastrum(diploid) 267.777
CNS0095594Slightly white alabastrum(diploid) 359.469
CNS0095595Whole white alabastrum(diploid) 254.727
CNS0095596Whole white alabastrum(diploid) 348.363
CNS0095597Whole white alabastrum(diploid) 451.163
CNS0095598Silvery flower (diploied) 167.903
CNS0095599Silvery flower (diploied) 2197.945
CNS0095600Silvery flower (diploied) 3194.739
CNS0095601Golden flower (diploid) 1306.489
CNS0095602Golden flower (diploid) 2199.026
CNS0095603Golden flower (diploid) 3195.522
CNS0095604Slightly white alabastrum(tetraploid) 185.745
CNS0095605Slightly white alabastrum(tetraploid) 269.543
CNS0095606Slightly white alabastrum(tetraploid) 3204.893
CNS0095607Whole white alabastrum(tetraploid) 142.773
CNS0095608Whole white alabastrum(tetraploid) 236.363
CNS0095609Whole white alabastrum(tetraploid) 3134.905
CNS0095610Silvery flower (tetraploid) 189.556
CNS0095611Silvery flower (tetraploid) 2121.116
CNS0095612Silvery flower (tetraploid) 3108.129
CNS0095613Golden flower (tetraploid) 157.118
CNS0095614Golden flower (tetraploid) 291.685
CNS0095615Golden flower (tetraploid) 368.819
CRA001975CRR073297Stem 163.189
CRR073298Stem 266.261
CRR073299Stem 361.913
CRR073300Leaf 189.540
CRR073301Leaf 277.210
CRR073302Leaf 365.791
CRR073303Juvenile bud 174.775
CRR073304Juvenile bud 258.173
CRR073305Juvenile bud 387.646
CRR073306Third green 166.481
CRR073307Third green 238.372
CRR073308Third green 352.813
CRR073309Second white 143.680
CRR073310Second white 251.355
CRR073311Second white 350.071
CRR073312Silver flowering 131.679
CRR073313Silver flowering 227.221
CRR073314Silver flowering 322.759
CRR073315Gold flowering 126.408
CRR073316Gold flowering 230.853
CRR073317Gold flowering 322.830
CRR073318Tawny withering 155.012
CRR073319Tawny withering 236.153
CRR073320Tawny withering 351.207