Detail information of GWHGAAZE031094


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO63219.11.06741E-93hypothetical protein CISIN_1g0013012mg, partial [Citrus sinensis]
Swissprottr|P93028|UBE11_ARATH1E-87Ubiquitin-activating enzyme E1 1
trEMBLtr|A0A067F781|A0A067F781_CITSI4E-94Uncharacterized protein {ECO:0000313|EMBL:KDO63219.1} (Fragment)
TAIR10AT2G30110.18E-76ubiquitin-activating enzyme 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5306374653064198-
GWHAAZE00000009mRNA5306374653064198-
GWHAAZE00000009exon5306374653064198-
GWHAAZE00000009CDS5306374653064198-
Transcript Sequence

Network for GWHGAAZE031094

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09358.11E1_UFD561451.50E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03178UBE1, UBA1 Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName
GO:0008641molecular_functionubiquitin-like modifier activating enzyme activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf46.287
SRR3591706second leaf29.644
SRR3591707mature leaf42.227
SRR3591708Shoot apex37.679
SRR3591709Stem74.413
SRR3591710White floral bud54.385
SRR3591711White flower77.338
SRR3591712Green floral bud48.433
SRR3591713Yellow flower48.372
SRP173429 SRR8316895Juvenile bud stage 27.982
SRR8316896Juvenile bud stage 39.904
SRR8316897Juvenile bud stage 20.334
SRR8316894Third green stage 12.631
SRR8316900Third green stage 43.609
SRR8316901Third green stage 44.514
SRR8316898Complete white stage 20.745
SRR8316899Complete white stage 61.218
SRR8316903Complete white stage 37.961
SRR8316902Silver flowering stage29.722
SRR8316904Silver flowering stage26.337
SRR8316905Silver flowering stage13.172
SRR8316906Gold flowering stage 49.707
SRR8316907Gold flowering stage 50.468
SRR8316908Gold flowering stage 49.377
SRP132670SRR6706286Control22.498
SRR6706287Light intensity 50%23.891
SRR6706288Light intensity 20%24.918
CNP0000432CNS0095592Slightly white alabastrum(diploid) 178.309
CNS0095593Slightly white alabastrum(diploid) 291.881
CNS0095594Slightly white alabastrum(diploid) 374.382
CNS0095595Whole white alabastrum(diploid) 267.646
CNS0095596Whole white alabastrum(diploid) 361.779
CNS0095597Whole white alabastrum(diploid) 458.946
CNS0095598Silvery flower (diploied) 162.912
CNS0095599Silvery flower (diploied) 280.178
CNS0095600Silvery flower (diploied) 372.352
CNS0095601Golden flower (diploid) 175.327
CNS0095602Golden flower (diploid) 264.160
CNS0095603Golden flower (diploid) 362.633
CNS0095604Slightly white alabastrum(tetraploid) 153.963
CNS0095605Slightly white alabastrum(tetraploid) 264.632
CNS0095606Slightly white alabastrum(tetraploid) 359.689
CNS0095607Whole white alabastrum(tetraploid) 156.854
CNS0095608Whole white alabastrum(tetraploid) 245.358
CNS0095609Whole white alabastrum(tetraploid) 343.034
CNS0095610Silvery flower (tetraploid) 174.435
CNS0095611Silvery flower (tetraploid) 266.644
CNS0095612Silvery flower (tetraploid) 351.947
CNS0095613Golden flower (tetraploid) 176.074
CNS0095614Golden flower (tetraploid) 267.894
CNS0095615Golden flower (tetraploid) 337.936
CRA001975CRR073297Stem 148.560
CRR073298Stem 246.540
CRR073299Stem 360.368
CRR073300Leaf 164.522
CRR073301Leaf 277.087
CRR073302Leaf 345.945
CRR073303Juvenile bud 188.462
CRR073304Juvenile bud 266.475
CRR073305Juvenile bud 3105.299
CRR073306Third green 184.699
CRR073307Third green 285.420
CRR073308Third green 382.751
CRR073309Second white 1130.066
CRR073310Second white 296.173
CRR073311Second white 385.681
CRR073312Silver flowering 182.388
CRR073313Silver flowering 296.922
CRR073314Silver flowering 387.493
CRR073315Gold flowering 160.116
CRR073316Gold flowering 264.610
CRR073317Gold flowering 354.746
CRR073318Tawny withering 195.087
CRR073319Tawny withering 2120.747
CRR073320Tawny withering 396.742