Gene detail

Detail information of GWHGAAZE031113

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009613007.1	0	PREDICTED: exocyst complex component EXO70A1-like isoform X1 [Nicotiana tomentosiformis]
Swissprot	tr\|Q9FGH9\|E70B1_ARATH	3E-120	Exocyst complex component EXO70B1
trEMBL	tr\|T2FDG1\|T2FDG1_NICBE	0	Exocyst 70 {ECO:0000313\|EMBL:AGV75881.1}
TAIR10	AT1G72470.1	0	exocyst subunit exo70 family protein D1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	53457418	53459193	-
GWHAAZE00000009	mRNA	53457418	53459193	-
GWHAAZE00000009	exon	53458948	53459193	-
GWHAAZE00000009	exon	53458071	53458911	-
GWHAAZE00000009	exon	53457418	53458040	-
GWHAAZE00000009	CDS	53458948	53459193	-
GWHAAZE00000009	CDS	53458071	53458911	-
GWHAAZE00000009	CDS	53457418	53458040	-

Transcript Sequence
>GWHTAAZE031147 ATGATCTTCGACAGCGATCGACAGGAGATTGATCTCTACTTACAGGCCGTCGACGAAATCCAACGATCAATGGAATCAGCCACTATCGCCGATGACCAGACCAAAGCCAACAGCGCGATCCAGATCGCCATGGCTAGGCTAGAGGACGAGTTTCGCAATATATTGATTGCTCACACAAGTCCGATCGAGACCGATTCACTTGTTGATCAGAGCTTTTCCTCCTCTCACTCTCACTCTCACTCTCCCGATGACGACGATGATACAGATGAGGACTCCGTTAGACCAGATGGAGATCTTCAGGAATCAACTGGTAGCAGTACGCTTGTTAGCTACAGATCTACTAATAGTATTCGTGAGCTCGATCTGATGCCATCCGAAGCTATTTATGATCTCCGAAGAATTGCCGAGAGGATGATATCTGCTGGTTATCTCCGCGAGTGCGTTCAGGTGTACGGCAGTGTACGCAAGTCTGTGGTGGACTCTAGCTTTAGGAGACTCGGAGTTGAGAAATTAAGCATTGGTGATATACAGAGGTTGGACTGGGAGGTTTTGGAGACGAAGATCAGACGGTGGATACGAGCTGCTAAAGTGTGTGTGAGGATTCTGTTTGCCAGCGAGAAGAAATTGTGTGAGCAAATCTTCGAAGGTTTAGGGACTGCTACGGATGATGCCTGTTTCATGGAGACTGTTAAAGGTCCGGCAATTCAACTCTTTAACTTTGCCGAAGCTATAAGTATTAGTCGTAGGTCTCCAGAGAAGTTGTTCAAGATCTTAGACCTTCACGACGCGTTGTCGGATTTGATGCCGGACATCGATGTTGTGTTTAATTCAAAGTCGCCAGAGTCGATCCGAGTTCAGGCGGCGGAGATACAGTCACGGCTAGCCGAGGCGTCGAGAGGGATATTATCGGAATTTGAGAACGCGGTGCTTCGAGAGCCATCTAGAATTCCAGTTCCTGGAGGAACAATTCATCCTTTGACTAGGTATGTGATGAATTATATCAGTCTGATCTCCGATTATAAGCAAACCCTAGCTGAATTGATTGTTTCTAAGCCCGCAACTGGTTCGAGATATTCCGATGATTCCAAGGAGCAAAGTACCTTGGCTCTGCATTTGATTTGGATCATTGTGATTTTACAATTTAATTTGGAGGGCAAGTCCAAGCACTACAAAGATGCTTCTTTGGCTCATTTGTTCATTATGAATAATGTTCATTACATTGTTCAGAAGATCAAAGGGTCTCCGGAACTGAGAGAGATGATCGGGGATAACTATTTGAGGAAGTTAACAGGGAAATATAGGCAAGCGGCTACGGGCTACGAGAGGTCAACCTGGGTGAGGGTGTTGTACTGTCTGAGAGATGAGGGGCTGCATGTGAGTGGCAGTTTTTCATCTGGGGTTTCAAGAACTGCTTTGAGAGAACGATTTAAGTCGTTCAATGCTATGTTTGAGGAGGTGCACAAGATTCAGGCTACATGGTTGGTGCCCGATACACAGCTCCGTGAGGAGCTTCGTATATCCATATCGGAGAAGTTGATCCCAGCTTACAGATCATTTCTTGGCCGATTTAGGAGTCATATAGAGAGTGGGAGGCACCCAGAGAATTACATCAAATACTCAGTTGAGGACCTTGAAACTGCCGTCTTGGATTTCTTTGAGGGATTCCCGGTATCCCAGCATGGGAGGAGGAGATCTCATGAAAGAGTGTAA

Network for GWHGAAZE031113

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	190	548	5.80E-123

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	18.667
	SRR3591706	second leaf	10.235
	SRR3591707	mature leaf	11.200
	SRR3591708	Shoot apex	11.422
	SRR3591709	Stem	23.677
	SRR3591710	White floral bud	22.462
	SRR3591711	White flower	21.843
	SRR3591712	Green floral bud	18.915
	SRR3591713	Yellow flower	13.309
SRP173429	SRR8316895	Juvenile bud stage	7.831
	SRR8316896	Juvenile bud stage	9.058
	SRR8316897	Juvenile bud stage	3.863
	SRR8316894	Third green stage	5.644
	SRR8316900	Third green stage	15.685
	SRR8316901	Third green stage	15.193
	SRR8316898	Complete white stage	14.548
	SRR8316899	Complete white stage	41.497
	SRR8316903	Complete white stage	21.932
	SRR8316902	Silver flowering stage	7.842
	SRR8316904	Silver flowering stage	11.137
	SRR8316905	Silver flowering stage	7.275
	SRR8316906	Gold flowering stage	17.938
	SRR8316907	Gold flowering stage	17.439
	SRR8316908	Gold flowering stage	23.776
SRP132670	SRR6706286	Control	17.037
	SRR6706287	Light intensity 50%	17.730
	SRR6706288	Light intensity 20%	20.955
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	6.037
	CNS0095593	Slightly white alabastrum(diploid) 2	7.890
	CNS0095594	Slightly white alabastrum(diploid) 3	6.335
	CNS0095595	Whole white alabastrum(diploid) 2	8.277
	CNS0095596	Whole white alabastrum(diploid) 3	5.809
	CNS0095597	Whole white alabastrum(diploid) 4	5.748
	CNS0095598	Silvery flower (diploied) 1	11.601
	CNS0095599	Silvery flower (diploied) 2	9.307
	CNS0095600	Silvery flower (diploied) 3	26.595
	CNS0095601	Golden flower (diploid) 1	12.688
	CNS0095602	Golden flower (diploid) 2	21.850
	CNS0095603	Golden flower (diploid) 3	21.805
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.539
	CNS0095605	Slightly white alabastrum(tetraploid) 2	7.421
	CNS0095606	Slightly white alabastrum(tetraploid) 3	27.297
	CNS0095607	Whole white alabastrum(tetraploid) 1	7.666
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.561
	CNS0095609	Whole white alabastrum(tetraploid) 3	16.882
	CNS0095610	Silvery flower (tetraploid) 1	21.820
	CNS0095611	Silvery flower (tetraploid) 2	20.354
	CNS0095612	Silvery flower (tetraploid) 3	28.294
	CNS0095613	Golden flower (tetraploid) 1	10.995
	CNS0095614	Golden flower (tetraploid) 2	18.206
	CNS0095615	Golden flower (tetraploid) 3	16.050
CRA001975	CRR073297	Stem 1	15.928
	CRR073298	Stem 2	17.437
	CRR073299	Stem 3	19.751
	CRR073300	Leaf 1	25.333
	CRR073301	Leaf 2	23.186
	CRR073302	Leaf 3	23.751
	CRR073303	Juvenile bud 1	27.439
	CRR073304	Juvenile bud 2	28.387
	CRR073305	Juvenile bud 3	46.344
	CRR073306	Third green 1	45.774
	CRR073307	Third green 2	37.160
	CRR073308	Third green 3	48.306
	CRR073309	Second white 1	49.519
	CRR073310	Second white 2	43.268
	CRR073311	Second white 3	41.572
	CRR073312	Silver flowering 1	52.630
	CRR073313	Silver flowering 2	56.871
	CRR073314	Silver flowering 3	39.028
	CRR073315	Gold flowering 1	13.817
	CRR073316	Gold flowering 2	15.846
	CRR073317	Gold flowering 3	18.140
	CRR073318	Tawny withering 1	25.858
	CRR073319	Tawny withering 2	21.858
	CRR073320	Tawny withering 3	26.705