Gene detail

Detail information of GWHGAAZE031159

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010247416.1	0	PREDICTED: exocyst complex component EXO70A1 [Nelumbo nucifera]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	3E-51	Exocyst complex component EXO70A1
trEMBL	tr\|A0A067KB50\|A0A067KB50_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP33456.1}
TAIR10	AT4G31540.1	1E-160	exocyst subunit exo70 family protein G1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	54096139	54097713	-
GWHAAZE00000009	mRNA	54096139	54097713	-
GWHAAZE00000009	exon	54096139	54097713	-
GWHAAZE00000009	CDS	54096139	54097713	-

Transcript Sequence
>GWHTAAZE031193 ATGGAGTTGCAGGCTACTGAGGAACGTTCGCGTCTTAAGGGAGGGTCTCTAAACACCTCGTTCGAGAAGTTGGAAAAAGAATTCAGACAACTCTTGGGAGAAATCAGTTTTCCTCCTGTTGAGGATTCCTCGCTTTCCTCCCTTGGGGACCAAACTTGCATTGCCGATCCATTTTCTTTGCCACTGCTTGTTATTCCCAAGTTGCATGCTATTATTGAGAGATTAAGTGCTCATAATCGTCTCGACAGGTGCATATCTACTTATGTTGATGTTCGGAGTTCGATGGCTCGAACAACTTTGCAAACTCTTGATCTGGATTACTTGGAGATATCATTATCGGAATTCGATAGCATGCAAAGTATCGAAGCCAATAACATAGATCAATGGGGAAGACATTTGGAATTTGCTGTGAAAAATCTATTGCAGCTGGAATACAGACTATGCAGTGATGTCTTCGAGAAGGTGGGATCGGATGTTTCAACGGAGTCTTTTGCAAAGATCGCTGTCCAATGTGGAATGCATAATTTTATCAAATTCGGGAACACAATTACGCAAGGAAAGAAGGAAGCAATCAAGCTCTTCAAGCTGTTGGACATATTTGCAGCTCTGAACCGATTGAGATCAGATTTCAACCAACTATTTGGAGGGAAGGCATGTTTTGAGATCCAAACTGAAACAAGAGAACTGGTCAAGAAGGTTGTGAATGGGGCTTGCGAGATCTTCTGGGAACTCTCGCTTCAAGTTGAGCTTCAAAGGCAGAGTATTCCTCCTTCCGATGGCAGTACCCCAAGGCTAGTGAGCTTCGTCACTGACTACTGTAATCAGCTCCTCCATGACAACTATAAACCAATAATGGCACAAGTTATGGAGATTCATTGGAGCTGGAATCATGGGACAAAATTCAAAAGGGAACTTGTTTTGACCGAGGTTCGTAACATAGTAAATTCACTTGAGCTCAACCTGGAGACATGGGCAAAGTCGTATGAGGACACTGCCTTGTCCAATCTTTTCAAGATGAATAATCACTGGTGCTTGTACAAGAATCTGAAGGGCACGAAGCTTGGTGATCTAATGGGAGAAGCTTGGTTAACAGGACATGAAGATAATGTGGAATATTATGGGGCGGCGTACTTGAGGGAGAGTTGGGGAAATCTTCCTGGTCTTTTGAGCGAGGAGGGACTGATCCTGTTCGAGGGTGGGAGAGCAGTTGATCGGGATCTGGTAAGGAAGAGAATCAATGCGTTTAGTGAAGCATTTGATGAAACGTATAGGAAGCAATCGGGGTGGGTGGTGTCCGATAAAGGCTTAAGATGGAAGATGTGTGAGGTTGTAGCAGAGGCCATCGTACCTGTTTATAAAAGGTACATGCAGAAGTGCATAATGCCGTGGTCTGTAGAACAAGAGTCAGGTCCAGGTAAGTACGTGAAATACAGCGTAGAGAGGTTGGAGAGTATGGTCAGGTCCCTGTTTCAGCCGAAGATAGGGACGTACGGCAGTGCTAAATGCACACAATTGATGGGTGACATGAAGAATGCTGTCTGCAATCACTTCTCGTCCACGCCTGCGGCTGCATGA

Network for GWHGAAZE031159

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	128	486	4.80E-84

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.315
	SRR3591706	second leaf	0.334
	SRR3591707	mature leaf	0.166
	SRR3591708	Shoot apex	0.132
	SRR3591709	Stem	1.426
	SRR3591710	White floral bud	0.061
	SRR3591711	White flower	0.342
	SRR3591712	Green floral bud	0.347
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.116
	SRR8316896	Juvenile bud stage	0.061
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.110
	SRR8316900	Third green stage	0.342
	SRR8316901	Third green stage	0.433
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.155
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.006
SRP132670	SRR6706286	Control	0.322
	SRR6706287	Light intensity 50%	0.353
	SRR6706288	Light intensity 20%	0.528
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.037
	CNS0095593	Slightly white alabastrum(diploid) 2	0.048
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.148
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.007
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.001
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.086
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.404
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.591
	CNS0095610	Silvery flower (tetraploid) 1	0.027
	CNS0095611	Silvery flower (tetraploid) 2	0.003
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.095
	CRR073298	Stem 2	0.181
	CRR073299	Stem 3	0.014
	CRR073300	Leaf 1	0.475
	CRR073301	Leaf 2	0.123
	CRR073302	Leaf 3	0.217
	CRR073303	Juvenile bud 1	0.265
	CRR073304	Juvenile bud 2	0.013
	CRR073305	Juvenile bud 3	0.677
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.003
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.029
	CRR073318	Tawny withering 1	2.554
	CRR073319	Tawny withering 2	0.004
	CRR073320	Tawny withering 3	3.117