Detail information of GWHGAAZE031192


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006445508.17.11942E-74hypothetical protein CICLE_v10022551mg [Citrus clementina]
COGYP_004984562.19E-12conserved protein of unknown function
trEMBLtr|A0A067H377|A0A067H377_CITSI3E-74Uncharacterized protein {ECO:0000313|EMBL:KDO85370.1}
TAIR10AT2G44525.15E-55Protein of unknown function (DUF498/DUF598)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5473358254738329+
GWHAAZE00000009mRNA5473358254738329+
GWHAAZE00000009exon5473358254733721+
GWHAAZE00000009exon5473486654734928+
GWHAAZE00000009exon5473503754735153+
GWHAAZE00000009exon5473628254736334+
GWHAAZE00000009exon5473745854737558+
GWHAAZE00000009exon5473824354738329+
GWHAAZE00000009CDS5473358254733721+
GWHAAZE00000009CDS5473486654734928+
GWHAAZE00000009CDS5473503754735153+
GWHAAZE00000009CDS5473628254736334+
GWHAAZE00000009CDS5473745854737558+
GWHAAZE00000009CDS5473824354738329+
Transcript Sequence

Network for GWHGAAZE031192

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04430.15DUF498691802.10E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09008NDUFAF3 Thermogenesis map04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf38.120
SRR3591706second leaf25.983
SRR3591707mature leaf15.022
SRR3591708Shoot apex39.307
SRR3591709Stem33.590
SRR3591710White floral bud30.054
SRR3591711White flower30.992
SRR3591712Green floral bud38.824
SRR3591713Yellow flower31.724
SRP173429 SRR8316895Juvenile bud stage 26.565
SRR8316896Juvenile bud stage 39.037
SRR8316897Juvenile bud stage 22.523
SRR8316894Third green stage 14.316
SRR8316900Third green stage 40.130
SRR8316901Third green stage 39.812
SRR8316898Complete white stage 11.604
SRR8316899Complete white stage 40.945
SRR8316903Complete white stage 20.280
SRR8316902Silver flowering stage14.528
SRR8316904Silver flowering stage18.625
SRR8316905Silver flowering stage9.552
SRR8316906Gold flowering stage 27.295
SRR8316907Gold flowering stage 26.641
SRR8316908Gold flowering stage 30.044
SRP132670SRR6706286Control42.724
SRR6706287Light intensity 50%42.962
SRR6706288Light intensity 20%46.553
CNP0000432CNS0095592Slightly white alabastrum(diploid) 155.224
CNS0095593Slightly white alabastrum(diploid) 242.846
CNS0095594Slightly white alabastrum(diploid) 359.849
CNS0095595Whole white alabastrum(diploid) 246.144
CNS0095596Whole white alabastrum(diploid) 339.694
CNS0095597Whole white alabastrum(diploid) 440.147
CNS0095598Silvery flower (diploied) 136.691
CNS0095599Silvery flower (diploied) 240.582
CNS0095600Silvery flower (diploied) 329.542
CNS0095601Golden flower (diploid) 135.530
CNS0095602Golden flower (diploid) 230.032
CNS0095603Golden flower (diploid) 328.042
CNS0095604Slightly white alabastrum(tetraploid) 143.547
CNS0095605Slightly white alabastrum(tetraploid) 248.956
CNS0095606Slightly white alabastrum(tetraploid) 345.618
CNS0095607Whole white alabastrum(tetraploid) 146.116
CNS0095608Whole white alabastrum(tetraploid) 241.554
CNS0095609Whole white alabastrum(tetraploid) 353.330
CNS0095610Silvery flower (tetraploid) 137.653
CNS0095611Silvery flower (tetraploid) 231.944
CNS0095612Silvery flower (tetraploid) 330.587
CNS0095613Golden flower (tetraploid) 132.884
CNS0095614Golden flower (tetraploid) 235.422
CNS0095615Golden flower (tetraploid) 319.299
CRA001975CRR073297Stem 140.979
CRR073298Stem 237.583
CRR073299Stem 339.869
CRR073300Leaf 137.735
CRR073301Leaf 242.918
CRR073302Leaf 343.530
CRR073303Juvenile bud 141.254
CRR073304Juvenile bud 233.116
CRR073305Juvenile bud 332.595
CRR073306Third green 114.070
CRR073307Third green 214.221
CRR073308Third green 317.050
CRR073309Second white 118.029
CRR073310Second white 220.175
CRR073311Second white 311.648
CRR073312Silver flowering 114.628
CRR073313Silver flowering 210.776
CRR073314Silver flowering 314.749
CRR073315Gold flowering 123.168
CRR073316Gold flowering 224.430
CRR073317Gold flowering 311.818
CRR073318Tawny withering 132.600
CRR073319Tawny withering 258.823
CRR073320Tawny withering 343.149