Detail information of GWHGAAZE031199


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011085248.10PREDICTED: nucleolar GTP-binding protein 1 isoform X1 [Sesamum indicum]
COGNP_126508.13E-38gtp1/obg family GTP-binding protein
Swissprottr|Q9C6I8|NOG1_ARATH4E-29Nucleolar GTP-binding protein 1
trEMBLtr|K4CW72|K4CW72_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc09g090460.2.1}
TAIR10AT1G80770.13E-149P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5487147854879817-
GWHAAZE00000009mRNA5487147854879817-
GWHAAZE00000009exon5487147854871699-
GWHAAZE00000009exon5487221054872322-
GWHAAZE00000009exon5487307154873107-
GWHAAZE00000009exon5487318854873259-
GWHAAZE00000009exon5487534954875462-
GWHAAZE00000009exon5487635054876421-
GWHAAZE00000009exon5487651354876551-
GWHAAZE00000009exon5487671154876785-
GWHAAZE00000009exon5487759254877705-
GWHAAZE00000009exon5487780254877866-
GWHAAZE00000009exon5487841054878530-
GWHAAZE00000009exon5487931354879387-
GWHAAZE00000009exon5487966554879817-
GWHAAZE00000009CDS5487966554879817-
GWHAAZE00000009CDS5487931354879387-
GWHAAZE00000009CDS5487841054878530-
GWHAAZE00000009CDS5487780254877866-
GWHAAZE00000009CDS5487759254877705-
GWHAAZE00000009CDS5487671154876785-
GWHAAZE00000009CDS5487651354876551-
GWHAAZE00000009CDS5487635054876421-
GWHAAZE00000009CDS5487534954875462-
GWHAAZE00000009CDS5487318854873259-
GWHAAZE00000009CDS5487307154873107-
GWHAAZE00000009CDS5487221054872322-
GWHAAZE00000009CDS5487147854871699-
Transcript Sequence

Network for GWHGAAZE031199

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17835.2NOG1_N892471.80E-41
PF02421.19FeoB_N2523088.00E-09
PF06858.15NOG13183741.00E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06943NOG1 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName
GO:0005525molecular_functionGTP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.619
SRR3591706second leaf16.416
SRR3591707mature leaf15.965
SRR3591708Shoot apex16.707
SRR3591709Stem8.215
SRR3591710White floral bud7.360
SRR3591711White flower8.404
SRR3591712Green floral bud9.351
SRR3591713Yellow flower5.656
SRP173429 SRR8316895Juvenile bud stage 7.992
SRR8316896Juvenile bud stage 11.437
SRR8316897Juvenile bud stage 6.638
SRR8316894Third green stage 4.972
SRR8316900Third green stage 11.752
SRR8316901Third green stage 12.365
SRR8316898Complete white stage 4.025
SRR8316899Complete white stage 11.140
SRR8316903Complete white stage 6.252
SRR8316902Silver flowering stage3.405
SRR8316904Silver flowering stage4.472
SRR8316905Silver flowering stage2.269
SRR8316906Gold flowering stage 10.813
SRR8316907Gold flowering stage 9.102
SRR8316908Gold flowering stage 11.934
SRP132670SRR6706286Control7.189
SRR6706287Light intensity 50%8.123
SRR6706288Light intensity 20%9.216
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.892
CNS0095593Slightly white alabastrum(diploid) 25.193
CNS0095594Slightly white alabastrum(diploid) 37.356
CNS0095595Whole white alabastrum(diploid) 26.068
CNS0095596Whole white alabastrum(diploid) 38.524
CNS0095597Whole white alabastrum(diploid) 47.224
CNS0095598Silvery flower (diploied) 112.247
CNS0095599Silvery flower (diploied) 27.252
CNS0095600Silvery flower (diploied) 38.810
CNS0095601Golden flower (diploid) 18.144
CNS0095602Golden flower (diploid) 29.015
CNS0095603Golden flower (diploid) 37.100
CNS0095604Slightly white alabastrum(tetraploid) 19.175
CNS0095605Slightly white alabastrum(tetraploid) 211.210
CNS0095606Slightly white alabastrum(tetraploid) 313.236
CNS0095607Whole white alabastrum(tetraploid) 17.671
CNS0095608Whole white alabastrum(tetraploid) 26.199
CNS0095609Whole white alabastrum(tetraploid) 311.568
CNS0095610Silvery flower (tetraploid) 117.723
CNS0095611Silvery flower (tetraploid) 219.410
CNS0095612Silvery flower (tetraploid) 316.090
CNS0095613Golden flower (tetraploid) 111.732
CNS0095614Golden flower (tetraploid) 213.106
CNS0095615Golden flower (tetraploid) 314.851
CRA001975CRR073297Stem 114.523
CRR073298Stem 211.438
CRR073299Stem 37.559
CRR073300Leaf 19.881
CRR073301Leaf 210.464
CRR073302Leaf 38.402
CRR073303Juvenile bud 18.679
CRR073304Juvenile bud 28.943
CRR073305Juvenile bud 36.208
CRR073306Third green 12.331
CRR073307Third green 21.684
CRR073308Third green 32.386
CRR073309Second white 14.981
CRR073310Second white 26.199
CRR073311Second white 33.829
CRR073312Silver flowering 12.891
CRR073313Silver flowering 22.984
CRR073314Silver flowering 32.168
CRR073315Gold flowering 17.923
CRR073316Gold flowering 212.301
CRR073317Gold flowering 35.961
CRR073318Tawny withering 13.472
CRR073319Tawny withering 25.004
CRR073320Tawny withering 35.943