Gene detail

Detail information of GWHGAAZE031275

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011090133.1	0	PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X2 [Sesamum indicum]
COG	YP_003435323.1	2E-109	thermosome
Swissprot	tr\|P28769\|TCPA_ARATH	0	T-complex protein 1 subunit alpha {ECO:0000303\|PubMed:11599560}
trEMBL	tr\|W9QHU5\|W9QHU5_9ROSA	0	Uncharacterized protein {ECO:0000313\|EMBL:EXB37575.1}
TAIR10	AT1G02080.2	0	transcription regulators

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	56319198	56363298	+
GWHAAZE00000009	mRNA	56319198	56363298	+
GWHAAZE00000009	exon	56319198	56319264	+
GWHAAZE00000009	exon	56319674	56319738	+
GWHAAZE00000009	exon	56320840	56320929	+
GWHAAZE00000009	exon	56321065	56321151	+
GWHAAZE00000009	exon	56321265	56321324	+
GWHAAZE00000009	exon	56321457	56321507	+
GWHAAZE00000009	exon	56321730	56321825	+
GWHAAZE00000009	exon	56323033	56323098	+
GWHAAZE00000009	exon	56323281	56323498	+
GWHAAZE00000009	exon	56323770	56323866	+
GWHAAZE00000009	exon	56324411	56324497	+
GWHAAZE00000009	exon	56324649	56324783	+
GWHAAZE00000009	exon	56325488	56325592	+
GWHAAZE00000009	exon	56327409	56327537	+
GWHAAZE00000009	exon	56327622	56327725	+
GWHAAZE00000009	exon	56328192	56328282	+
GWHAAZE00000009	exon	56328951	56329022	+
GWHAAZE00000009	exon	56334263	56334560	+
GWHAAZE00000009	exon	56335068	56335296	+
GWHAAZE00000009	exon	56335841	56336174	+
GWHAAZE00000009	exon	56336884	56336997	+
GWHAAZE00000009	exon	56337160	56337288	+
GWHAAZE00000009	exon	56337599	56337790	+
GWHAAZE00000009	exon	56338044	56338238	+
GWHAAZE00000009	exon	56339762	56339899	+
GWHAAZE00000009	exon	56339986	56340087	+
GWHAAZE00000009	exon	56340185	56340441	+
GWHAAZE00000009	exon	56341470	56341573	+
GWHAAZE00000009	exon	56342622	56342716	+
GWHAAZE00000009	exon	56342794	56343027	+
GWHAAZE00000009	exon	56346127	56346348	+
GWHAAZE00000009	exon	56346456	56346537	+
GWHAAZE00000009	exon	56346901	56346968	+
GWHAAZE00000009	exon	56348257	56348402	+
GWHAAZE00000009	exon	56348514	56348622	+
GWHAAZE00000009	exon	56348716	56348862	+
GWHAAZE00000009	exon	56348958	56349005	+
GWHAAZE00000009	exon	56349087	56349215	+
GWHAAZE00000009	exon	56349296	56349538	+
GWHAAZE00000009	exon	56349624	56349755	+
GWHAAZE00000009	exon	56350263	56350348	+
GWHAAZE00000009	exon	56350439	56350544	+
GWHAAZE00000009	exon	56350632	56350727	+
GWHAAZE00000009	exon	56351121	56351273	+
GWHAAZE00000009	exon	56352897	56353079	+
GWHAAZE00000009	exon	56353161	56353387	+
GWHAAZE00000009	exon	56353745	56353874	+
GWHAAZE00000009	exon	56353963	56354088	+
GWHAAZE00000009	exon	56354380	56354424	+
GWHAAZE00000009	exon	56354597	56354674	+
GWHAAZE00000009	exon	56354753	56354869	+
GWHAAZE00000009	exon	56355236	56355362	+
GWHAAZE00000009	exon	56355448	56355548	+
GWHAAZE00000009	exon	56356118	56356249	+
GWHAAZE00000009	exon	56356338	56356421	+
GWHAAZE00000009	exon	56356940	56357086	+
GWHAAZE00000009	exon	56358035	56358181	+
GWHAAZE00000009	exon	56358257	56358327	+
GWHAAZE00000009	exon	56358685	56358838	+
GWHAAZE00000009	exon	56358931	56359122	+
GWHAAZE00000009	exon	56359877	56359981	+
GWHAAZE00000009	exon	56360155	56360289	+
GWHAAZE00000009	exon	56360413	56360652	+
GWHAAZE00000009	exon	56360863	56360964	+
GWHAAZE00000009	exon	56361123	56361194	+
GWHAAZE00000009	exon	56363044	56363298	+
GWHAAZE00000009	CDS	56319198	56319264	+
GWHAAZE00000009	CDS	56319674	56319738	+
GWHAAZE00000009	CDS	56320840	56320929	+
GWHAAZE00000009	CDS	56321065	56321151	+
GWHAAZE00000009	CDS	56321265	56321324	+
GWHAAZE00000009	CDS	56321457	56321507	+
GWHAAZE00000009	CDS	56321730	56321825	+
GWHAAZE00000009	CDS	56323033	56323098	+
GWHAAZE00000009	CDS	56323281	56323498	+
GWHAAZE00000009	CDS	56323770	56323866	+
GWHAAZE00000009	CDS	56324411	56324497	+
GWHAAZE00000009	CDS	56324649	56324783	+
GWHAAZE00000009	CDS	56325488	56325592	+
GWHAAZE00000009	CDS	56327409	56327537	+
GWHAAZE00000009	CDS	56327622	56327725	+
GWHAAZE00000009	CDS	56328192	56328282	+
GWHAAZE00000009	CDS	56328951	56329022	+
GWHAAZE00000009	CDS	56334263	56334560	+
GWHAAZE00000009	CDS	56335068	56335296	+
GWHAAZE00000009	CDS	56335841	56336174	+
GWHAAZE00000009	CDS	56336884	56336997	+
GWHAAZE00000009	CDS	56337160	56337288	+
GWHAAZE00000009	CDS	56337599	56337790	+
GWHAAZE00000009	CDS	56338044	56338238	+
GWHAAZE00000009	CDS	56339762	56339899	+
GWHAAZE00000009	CDS	56339986	56340087	+
GWHAAZE00000009	CDS	56340185	56340441	+
GWHAAZE00000009	CDS	56341470	56341573	+
GWHAAZE00000009	CDS	56342622	56342716	+
GWHAAZE00000009	CDS	56342794	56343027	+
GWHAAZE00000009	CDS	56346127	56346348	+
GWHAAZE00000009	CDS	56346456	56346537	+
GWHAAZE00000009	CDS	56346901	56346968	+
GWHAAZE00000009	CDS	56348257	56348402	+
GWHAAZE00000009	CDS	56348514	56348622	+
GWHAAZE00000009	CDS	56348716	56348862	+
GWHAAZE00000009	CDS	56348958	56349005	+
GWHAAZE00000009	CDS	56349087	56349215	+
GWHAAZE00000009	CDS	56349296	56349538	+
GWHAAZE00000009	CDS	56349624	56349755	+
GWHAAZE00000009	CDS	56350263	56350348	+
GWHAAZE00000009	CDS	56350439	56350544	+
GWHAAZE00000009	CDS	56350632	56350727	+
GWHAAZE00000009	CDS	56351121	56351273	+
GWHAAZE00000009	CDS	56352897	56353079	+
GWHAAZE00000009	CDS	56353161	56353387	+
GWHAAZE00000009	CDS	56353745	56353874	+
GWHAAZE00000009	CDS	56353963	56354088	+
GWHAAZE00000009	CDS	56354380	56354424	+
GWHAAZE00000009	CDS	56354597	56354674	+
GWHAAZE00000009	CDS	56354753	56354869	+
GWHAAZE00000009	CDS	56355236	56355362	+
GWHAAZE00000009	CDS	56355448	56355548	+
GWHAAZE00000009	CDS	56356118	56356249	+
GWHAAZE00000009	CDS	56356338	56356421	+
GWHAAZE00000009	CDS	56356940	56357086	+
GWHAAZE00000009	CDS	56358035	56358181	+
GWHAAZE00000009	CDS	56358257	56358327	+
GWHAAZE00000009	CDS	56358685	56358838	+
GWHAAZE00000009	CDS	56358931	56359122	+
GWHAAZE00000009	CDS	56359877	56359981	+
GWHAAZE00000009	CDS	56360155	56360289	+
GWHAAZE00000009	CDS	56360413	56360652	+
GWHAAZE00000009	CDS	56360863	56360964	+
GWHAAZE00000009	CDS	56361123	56361194	+
GWHAAZE00000009	CDS	56363044	56363298	+

Transcript Sequence
>GWHTAAZE031309 ATGGCGATTGGGAATCCTGATATTTTAGGGGACCGCCAATCTGGTCAAGATGTTCGCACTCAAAACGTGGTAGCATGTCAAGCAATTTCAAATATTGTGAAATCTTCACTTGGTCCCGTTGGACTTGACAAGATGCTAGTTGATGATATTGGCGACGTAACAATCACAAATGACGGTGCTACAATTCTCAAGATGTTAGAAGTTGAGCATCCAGCTGCCAAGGTTCTTGTTGAGCTGGCTGAGCTTCAAGACAGAGAAGTTGGAGATGGAACAACTTCGGTGGTCATTATAGCTGCAGAGTTGCTTAAGAGAGCAAATGATCTGGTGAGAAATAAGATTCACCCTACATCTATAATCAGCGGATACAGACTTGCAATGAGGGAAGCATGCAAATATATTGACGAAAAATTAGCAGTGAAGGTTGAGAAGCTTGGGAAAGATTCTCTTATAAACTGTGCCAAGACTAGCATGTCCTCAAAATTGATAGGTGGTGACAGTGACTTCTTTGCGAATTTGGTTGTGGAAGCAGTGCAAGCGGTGAAGATGACCAACGCCCGTGGTGAAATCAAGTATCCAATCAAGGGAATCAATATACTCAAAGCTCATGGGAAAAGCGCTAAAGATAGTTATTTGTTAAAAGGCTATGCTCTCAATACTGGCCGTGCTGCCCAGGGTATGCCTATGAGGGTTGCTCCTGCAAAGATCGCCTGCCTCGATTTCAATCTTCAAAAGACAAAAATGCAAATGGGTATCCAAGTTTTAGTCACCGATCCTCGTGAATTGGAAAAGATTCGTCAAAGAGAAGCTGATATGACGAAAGAGAGGATTGAGAAGCTTCTAAAGGCTGGAGCTAATGTTGTTTTAACCACAAAGGGGATTGATGACATGGCACTCAAGTACTTTGTGGAGGCTGGTGCAATTGCTGTGAGGCGTGTTCGGAAAGAGGACTTGCGCCATGTTGCCAAGGCAACGGGCGCAACTGCGGTTTCAACATTTGCTGACATGGAAGGAGACGAAACATTTGATTCGTCACTCCTTGGACATGCTGAAGAAGTAGTGGAGGAGCGCATTGCTGATGATGATGTTATTATGATCAAAGGGACCAAAAACTCCAGTGCAGCCTCATTGATACTGAGAGGTGCAAATGACTTCATGCTTGATGAGATGGACAGGGCTTTGCATGATGCTTTATCCATTGTCAAGAGGACCTTGGAATCCAATACGGTTGTTGCAGGTGGAGGTGCAGTTGAGTCTGCCTTGTCTGTGTACTTGGAGTATCTTGCAACAACTTTAGGATCTCGGGAGCAACTGGCAATTGCAGAGTTTGCTGAATCTTTATTAATCATTCCGAAGGTTCTTGCTGTCAATGCTGCAAAGGATGCAACTGAGTTAGTTGCAAAGCTGCGTGCTTATCACCATACTGCACAAACAAAGGCAGATAAGAAGCATCTATCAAGCATGGGACTAGACCTATTGAAGGGAACTGTCAGGAACAACTTGGAAGCTGGAGTTATTGAGCCTGCAATGAGCAAAGTAAAGATATTACAGGATATGTTTGGTTTAACTTCATCTTTCTATCCTGAATTTGTGACTTTAGATGTGGCAGAAGCACAACATTTTTATATTGGATATGGGATTGAGGGAAGCATATTGGTGCTCCAAACCTGCTTGGATAATTTGAATATTTATGAGAATGACTTGAAGAATATGAAGCTTGCACCTGTTATTGCTTCAGTTTTCAAACACATCTTGGAGAAACCAAATTTCAGTACTATTATTTGTGAGTCGCTGAGAACTGCAGCAGTTAATGAAACTTTACTGGAGAATCTTTGTAATGCATTACGGTTGTCGTCATCGGAGAAAATTGGATTCGGTCTCGCTTTATCAGATTCAGAAAATCTTGACATCAGAATGTGTGGGAAGAACTTCTGCATGGCTCAGATTGAGGACTTATGTGCAAATAATCTGACTTTGGATTCTGCTGAGCAAATTCAAAACATACTCATATTTCTGAACCGATTTGAAGGCCTTTCAAAGCTTGTTGATTCATTCATGCAGATGTTATCTCTAGTGCAGTTGAGAGAAGATTTTGCATTTATTTTATCTCCATTACTTCTATCTGAACTGCGTGAGGCCAACTTCTTGAGGAATTTGGATTTGGTCGATAATGGGAATGAATTTGATGATATTCTAGCAGAAATGGAGAAGGAAACAAGTATGTCAGATATAATGAAGGAATTGGGTTATGGATGCACAGTGAACGTTACGCAGTGCACGGAGATGTTATCTCTTTTCTTACCACTGACTGAAGTCACTGTTGCTAAGATAATTGGCACAATTGTGCGGACCGATGCAGGTCTCGAGGACAGTTCAAACACATTCTTGACTTTCTGTTCTGCTGTTGGCAGCAGCAGTTTGTCTGATCTGCCACCGTTGAACTCATGGAACATTGATGTCCTTGTAGATTCAATCAAGCAGCTTTCTCCTGGAATCAATTGGATCAAAGTTTTTGCGAACATTGATCATGAGGGATTCTACATTCCTAATGAGGCGGCTTTTTCTGTATTCATGTCTATCTACAAACAGGCATGCCAGGATCCATTTCCCATTAGTGTTATTTGTGGCTCTGTTTGGAAGAACACTGAGGGACAGCTTTCCTTTCTAAAAAATGCCGTCGCTGTACCACCCGAAGTATTTAGCTTTGCTCATTCTGGGAGGCAGCTGGGATATACTGATGCTCTGAATGATCTTAAGTTTCAATCAGGACATGCAAATCATGCATGGCTATGTCTTGACCTTTTGGAAGTGTTGTGTCAGTTAGCTGAGAGGGGCCATGCTACTGTAGTTCGATCAATGCTCGAGTATCCTCTTAAGCATTGCCCTGAAGTCTTGATTCTTGGGATCGCCCAAATCAATTCTGCATATAATCTCCTCCAATACGAAGTTTCTTATGTTGTTTTGCCCATGGTATTTAAAAGTGCTGCTGCGAATAGTATTGCTCTTCATCTCTGGAATGTTAACCCTAGCATTTTGATGCGGGGATTTGTAGATGCTCTCACTGTGGATCAGGACCATATAACTAGAGTTTTTGACTTGTGCCAAGAGCTAAAGATTCTATCACCAGTATTGGATATAATTCCTTGTTCTTTTGGTATTAAACTGGCTGCACTTGCTTCTCGGAAAGACCTTGTGGACCTTGAGACATGGTTGAGCTCTAATTTAAGTACATATAAAGATATTTTCTTTGAGGAGTGCATCAATTTTGTCAAGTCGGTTAAGTTAGCTAGCCGTTTTCATCAGTCTGGAGCTCAGTGGAGTGTTTATTCTGAGACAATTTCGACCTTCTTAAAGGTTCTTCAAGCTCATGCAGGCTTGATTTCCTCTAGCCAGCTTTCTGAGGAAATCGAAAAGTTGAATGGGACATTTATGCATGCTAGTTCAAGGACGAAGAATGGTGCTGGTACTACTGATTCATCAACTTCTGATGGATATGCAGAAGATGTTGAGGCAGAGGCAAACTCTTATTTCCATCAAATGTTTTCTGGTCAGTTGACCATTGATTCAATGGTTCAAACGCTTGCCCGATTCAGAGAATCTACTGAAAAAAGGGAACAATCAATTTTTGATTGCATGATTGCTAATCTATTTGAGGAATACAAATTCTTCTCCAAGTACCCAGAAAGGCAGCTCAAAATTGCTGCAGTTCTCTTTGGATCACTTATTAAGCACCAGCTTGTTACACATCTTACACTCGGTATCGCCTTGCGAGCTGTTTTGGATGCCTTGCGCAAACCTGCAGATTCCAAAATGTTTGTGTTTGGGACCTTGTCTGTAGAACAGTTTGTGGACCGTCTGATCGAGTGGCCACAGTACTGCAATCACATCTTACAAATATCTCATTTACGTTCTACACATTCGGAGCTTGTTACATTCATCGAACGGGCACTTGCCCGAATTTCTTCAGGTCACCCGGAATCAGAAACGGGCCACAGTTCTGCGACCGACCAACAGCAAGATTCAGTACCAGCAACACAAGTAGAGATGCCGGTTTCATCATTCCCTCTAATTGGATCTAGTAGTGCACAGCAAGGGTTACAGCTTTCTTCTGCAGCTCAGCTTCAACAAAGACACCAAATTACTTTAGAGGAAAGGCAGAAAGCCTCTGTAACAATTTCCAACTACATGAAGCCCGTTCTACCTCCGGCAGCTCAACCTTCAGTTGTGCCTCCAACTGATGCACTCACCACTCAAAAGGCATGCACTCCACAGAGTGCAGTTGTTGCTTCACCAGCATTAGCTTCCTCTACCGGTTTTGTTCGCTCATCCCGAGCAACTTCCTCAGCAAGGTTTGGCTCTGCTTTGAATATCGAAACACTTGTTGCTGCTGCGGAGAGAAGAGAAACTCCCATAGAGGCTCCAGCATCTGAAATACAGGACAAGATATCATTTATTATTAATAATTTATCTACTGCAAATCTTGAAGCTAAAGCAAAAGAAATTGCTGAGTTTTTGAAGGAACAGTACTATCCCTGGTTTGCACAGTATATGGTCATGAAAAGAGCAAGCATCGAGCCAAATTTCCATGACTTGTACTTGAAGTTCCTGGACAAAGTTAATTTAAAGCCTTTGAACAAAGAGATTATCCAAGCCACTTATGAAAACTGCAAGGTTCTTTTAGGATCGGAGCTGATAAAGTCAAGTTCTGAAGAACGTTCGCTGCTGAAAAATCTTGGAAGCTGGCTTGGGAAGCTTACGATTGGCAGAAATCAGGTTTTACGGGCACGGGAGATCGATCCTAAATCTTTGATTATCGAGGCATATGAGAAGGGTTTGATGATTGCAGTAATTCCGTTTACCTCCAAGATTTTGGAACCATGCCAAAGCAGTCTTGCATATAAACCTCCTAATCCCTGGACTGTGGGAATTCTTGGATTACTTGTTGAGATTTATGCAATGCCAAATTTGAAAATGAACCTCAAGTTTGACATTGAGGTCCTATTCAAGAACCTTGGTGTGGATATGAAGGATGTAACTCCAACTTCTCTTCTCAAGGACAGGGTGAGGGAAGTTGAAGGAAACCCTGATTTTTCAACCAAAGATGTTGTATCATCCCAATCACAGATGGTTAGCGAAGTTAAATCTGGTGGTATAGTATCTACAATAAATCAAGTTGATCTACCACTTGATGTTGCAACTCCATCTCTCCCAAGCAGCCATTCACGTATATTAGCTCAGTATGCTGCTCCTTTGCATATTTCTTCTGGAACTTTGATGGAGGATGAGAAGCTGGCAGCTTTGGGCTTGTCCGATCAGTTGCCTTCTGCTCAAGGGCTTCTACAAGGACAATCACCATTTCCTGTTACTCAGCTTTCTGCTCCATCATCTAATATCGAACAGCAAGTTGTTGTTAACTCTAAGCTCCATGCTCTAGGACTGCAACTACATTTTCAGAGTGTTCTTCCAATTGCCATGGATAGGGCCATCAAAGAGATAGTGTCTAGTATTGTACAGCGAAGTGTTTCTATAGCAACTCAAACAACGAAAGAACTTGTTTTAAAGGATTATGCCATGGAATCGGATGAGAGTCGTATACGAAGTGCAGCACACTTGATGGTTGCAAGTTTGGCTGGAAGTCTGGCTCATGTGACTTGCAAGGAACCTCTTCGTGGTTCAATATCAAGTCAGCTGAGGAATTCTCTTCAGGGTTTAAGTATTGCAAGTGAACTGCTTGAGCACGCTGTACAGCTTGTAACTAATGATAACCTCGATCTGGGATGTGCACTTATTGAACAAGCTGCAACAGAGAAGGCATTACAAACTATTGATGGTGAAATTGCTCAACAACTTTCGATCAGAAGGAAGCATAGAGAGGGCGTTGGTTCTACGTTTTTTGATGCAAGCCTTTATACACAAGGTCATATGGGTGTTCTACCAGAGGCTCTCCGCCCTAAACCTGGACGGTTATCTCATTCCCAACAACGAGTTTATGAGGATTTTGTTCGGTTACCCTGGCAAAATCAATCAGGCCAGAATTCAAATGCTGGTCCTGCAGCTTCATCGGGTAGTGGCATACTGTCCCGGGGATATGGTTCAGCATCTGGTCAACTAAACCCTAGCATGTACTCATCTGGCGTAGGGAGCACGGGCATTGGTGCTGTTGCACAATCGTTGGACTTTGTACCTGAGGAGACAGAGTCCAATTTGGCAAAACTTCATAGTGCTTCCTCGGTTCATATCGGGATGGCTGAAGATACTGGTCCACACAACTTTGAAAATAGCACCGTCATTTCTTCGTTTTCTTCCGCACCTGCTCCTGAACTGCATTCAGTTGAACCTTCTAATGTTAAAGACTTTGGAGCTGCTTCTTCACCAATACCTTCTCCTTCTGCTTCTGAGCGCCTTGCAAGTAACATATCAGAACCTATATTGACTACAGGCGATGCATTGGATATGTATCAGATTATTTCAGAAAAGCTAGAGACTTTGGTAGCCAGTGACGCCAAGGAAGGAGAAATTCAGGCAATTATTGCTGAGGTTCCTGCGATCATTCTCAGATGTATTAGTCGAGATGAGGCTACCTTGGCCGTCGCTCAAAAGGTTTTCAAGGGTCTATATGAGAATGCATCAAATGGTGCACACGTTGGCGCCCATCTTGCTATTTTGGCTGCCATTCGTGATGTTAGCAAGCTTGTTGTCAAGGAGCTGACTAGCTGGGTGATTTACTCCGATGAGGACCGAAAGTTCAACAAAGATGTTACTATTGGTCTTATTCGCAATGAACTACTAAACCTTGCAGAGTATAATGTTCATATGGCAAAGCTTCTTGATGCTGGAAGGAACAAGGCTGCTACTGAGTTTGCTATTTCCCTCATTCAAACATTGGTAATTAGTGACTCAAGTGTCATATCCGAGCTTCACAATCTCGTTGATGCACTAGCAAAGCTTGCTGCTCGGCCCGGATCACCAGAATCACTGCAACAGTTGGTTGAGATTGCAAGGAATCCTGCTGCTGTTTCTTTGTCTGGCCTTACTATTGGGAAGGATGATAACACCAGACAATCCAGAGAGAGAAAGGCTACTGGGAACTCTACAGTAAGCAGAGAAGACTACAATGTTCCAGAATCTGTGGAACCAGATCCTGCTGGTTTTCGTGAGCAGGTTTCGATGCTGTTTGCGGAATGGTACCGAATATGCGAACTCCCTGGAGCAAATGATGCAGCTTGTGCTCATTTTGTCTTGCAATTGCTCCAGAGTGGACTTCTTAAAGGGGATGCTATCTCCGATCGCTTTTTCCGCTGTCTCATGGTTCTGTCTGTGACTGTGAAGTATGTTCTGAAAGATGCAGAGGAGACAAAAGCGTCTTTTAATCCTAGGCCTTATTTCCGGTTGTTCATTAACTGGCTGCTGGACCTGAGTTCCTTGGAACCCGTGATTGATGGTGCAAATTTTCAGGTTTTGACAACTTTGGCAAATACATTCCATGCGCTGCAGCCGCTTAAAGTTCCTGCATTTAGGTGGGTATGCTTTGCATGGCTTGAGCTAGTGAGTCACAGAAGTTTCATGCCTAAATTACTTACCGGAAATGGTCAAAAGGGTTGGCCTTATTTTCAACGCTTACTAGTAGACTTGTTCCAGTTCATGGAACCGTTCTTGCGGAATGCTGAACTTGGAGAGCCGGTTCATTTTCTGTATAAAGGCACACTCAGGGTGTTGTTGGTATTACTTCATGATTTCCCAGAGTTCCTCTGTGATTATCATTTCAGCTTCTGTGATGTAATTCCTCCAAGCTGCATTCAGATGCGTAATATAATCCTCAGTGCATTTCCCCGTAATATGAGGCTACCTGATCCATCGACTCCCAACTTAAAGATTGATCTGCTAGCAGAGATTAGTCAATCGCCTCGGATTCTATCTGAGGTGGACGCAGTTCTTAAAGCGAAACAGATGAAGAACGACGTAGATGAGTATTTGAAGACGAGGCAACAGGGGTCTTCATTTCTCTCTGAGTTAAAGCAAAAACTGCTGCTTCCACCAAGCGAAGCTGCTCGGGCTGGGACCCGATACAGTGTTCCTCTGATCAACTCCCTTGTACTTTACGTTGGAATGCAGGCTATACAGCAACTGCAGGCAAGAACTCCCCCTCACGCCCAATCAATGGCAAGTAGTGTGCCACTTGCCGTGTTCTTAGTGGGCGCAGCTTTGGACATCTTTCAAACGCTAATTGTAGACCTAGATACTGAGGGTCGCTACCTCTTCCTCAACGCGATTGCTAACCAGCTTCGGTATCCGAACAATCATACACATTACTTCTCCTTCATCCTTCTTTACTTGTTTGCCGAATCAAACCAGGAAGTGATACAGGAACAAATAACGAGAGTTTTATTGGAGCGTCTAATTGTTAATCGGCCTCATCCATGGGGTCTTCTGATTACTTTCATTGAGCTAATAAAGAACCCTAGGTACAACTTCTGGAGCAGGTCATTCACAAGGTGTGCACCTGAGATTGAGAAGCTATTTGAGTCGAACTGCAGCATGTTGCCGCCTGCCCCTCCAGCTGAAGCCCCACCACCACTACTGGTGGTCCTTCTCCTCCTCAGGTTGGCTGCTGCCGCCGCGGCACTTCCTCTCTGGGGAGCTCCTCCATTCAAAGCCATTTATGTACCTCACAACCATTTTGAGAATTTTAAGAGAATTAGGTTCCACTTCACAAACATGAACGTTTTTAAGCGTGTTTTGAAGAAAACAGAACATATAATACGGTTTAGAAAGAAAATATAA

Network for GWHGAAZE031275

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00118.25	Cpn60_TCP1	29	516	4.70E-145
PF16418.6	CNOT1_HEAT	988	1120	3.60E-27
PF16417.6	CNOT1_TTP_bind	1150	1318	8.40E-67
PF16415.6	CNOT1_CAF1_bind	1470	1689	4.70E-90
PF12842.8	DUF3819	1815	1956	1.00E-49
PF04054.16	Not1	2469	2841	2.30E-147

Protein Sequence

>GWHPAAZE031293
MAIGNPDILGDRQSGQDVRTQNVVACQAISNIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYIDEKLAVKVEKLGKDSLINCAKTSMSSKLIGGDSDFFANLVVEAVQAVKMTNARGEIKYPIKGINILKAHGKSAKDSYLLKGYALNTGRAAQGMPMRVAPAKIACLDFNLQKTKMQMGIQVLVTDPRELEKIRQREADMTKERIEKLLKAGANVVLTTKGIDDMALKYFVEAGAIAVRRVRKEDLRHVAKATGATAVSTFADMEGDETFDSSLLGHAEEVVEERIADDDVIMIKGTKNSSAASLILRGANDFMLDEMDRALHDALSIVKRTLESNTVVAGGGAVESALSVYLEYLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHLSSMGLDLLKGTVRNNLEAGVIEPAMSKVKILQDMFGLTSSFYPEFVTLDVAEAQHFYIGYGIEGSILVLQTCLDNLNIYENDLKNMKLAPVIASVFKHILEKPNFSTIICESLRTAAVNETLLENLCNALRLSSSEKIGFGLALSDSENLDIRMCGKNFCMAQIEDLCANNLTLDSAEQIQNILIFLNRFEGLSKLVDSFMQMLSLVQLREDFAFILSPLLLSELREANFLRNLDLVDNGNEFDDILAEMEKETSMSDIMKELGYGCTVNVTQCTEMLSLFLPLTEVTVAKIIGTIVRTDAGLEDSSNTFLTFCSAVGSSSLSDLPPLNSWNIDVLVDSIKQLSPGINWIKVFANIDHEGFYIPNEAAFSVFMSIYKQACQDPFPISVICGSVWKNTEGQLSFLKNAVAVPPEVFSFAHSGRQLGYTDALNDLKFQSGHANHAWLCLDLLEVLCQLAERGHATVVRSMLEYPLKHCPEVLILGIAQINSAYNLLQYEVSYVVLPMVFKSAAANSIALHLWNVNPSILMRGFVDALTVDQDHITRVFDLCQELKILSPVLDIIPCSFGIKLAALASRKDLVDLETWLSSNLSTYKDIFFEECINFVKSVKLASRFHQSGAQWSVYSETISTFLKVLQAHAGLISSSQLSEEIEKLNGTFMHASSRTKNGAGTTDSSTSDGYAEDVEAEANSYFHQMFSGQLTIDSMVQTLARFRESTEKREQSIFDCMIANLFEEYKFFSKYPERQLKIAAVLFGSLIKHQLVTHLTLGIALRAVLDALRKPADSKMFVFGTLSVEQFVDRLIEWPQYCNHILQISHLRSTHSELVTFIERALARISSGHPESETGHSSATDQQQDSVPATQVEMPVSSFPLIGSSSAQQGLQLSSAAQLQQRHQITLEERQKASVTISNYMKPVLPPAAQPSVVPPTDALTTQKACTPQSAVVASPALASSTGFVRSSRATSSARFGSALNIETLVAAAERRETPIEAPASEIQDKISFIINNLSTANLEAKAKEIAEFLKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNLKPLNKEIIQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYKPPNPWTVGILGLLVEIYAMPNLKMNLKFDIEVLFKNLGVDMKDVTPTSLLKDRVREVEGNPDFSTKDVVSSQSQMVSEVKSGGIVSTINQVDLPLDVATPSLPSSHSRILAQYAAPLHISSGTLMEDEKLAALGLSDQLPSAQGLLQGQSPFPVTQLSAPSSNIEQQVVVNSKLHALGLQLHFQSVLPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDESRIRSAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLSIASELLEHAVQLVTNDNLDLGCALIEQAATEKALQTIDGEIAQQLSIRRKHREGVGSTFFDASLYTQGHMGVLPEALRPKPGRLSHSQQRVYEDFVRLPWQNQSGQNSNAGPAASSGSGILSRGYGSASGQLNPSMYSSGVGSTGIGAVAQSLDFVPEETESNLAKLHSASSVHIGMAEDTGPHNFENSTVISSFSSAPAPELHSVEPSNVKDFGAASSPIPSPSASERLASNISEPILTTGDALDMYQIISEKLETLVASDAKEGEIQAIIAEVPAIILRCISRDEATLAVAQKVFKGLYENASNGAHVGAHLAILAAIRDVSKLVVKELTSWVIYSDEDRKFNKDVTIGLIRNELLNLAEYNVHMAKLLDAGRNKAATEFAISLIQTLVISDSSVISELHNLVDALAKLAARPGSPESLQQLVEIARNPAAVSLSGLTIGKDDNTRQSRERKATGNSTVSREDYNVPESVEPDPAGFREQVSMLFAEWYRICELPGANDAACAHFVLQLLQSGLLKGDAISDRFFRCLMVLSVTVKYVLKDAEETKASFNPRPYFRLFINWLLDLSSLEPVIDGANFQVLTTLANTFHALQPLKVPAFRWVCFAWLELVSHRSFMPKLLTGNGQKGWPYFQRLLVDLFQFMEPFLRNAELGEPVHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDAVLKAKQMKNDVDEYLKTRQQGSSFLSELKQKLLLPPSEAARAGTRYSVPLINSLVLYVGMQAIQQLQARTPPHAQSMASSVPLAVFLVGAALDIFQTLIVDLDTEGRYLFLNAIANQLRYPNNHTHYFSFILLYLFAESNQEVIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWSRSFTRCAPEIEKLFESNCSMLPPAPPAEAPPPLLVVLLLLRLAAAAAALPLWGAPPFKAIYVPHNHFENFKRIRFHFTNMNVFKRVLKKTEHIIRFRKKI

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12604	CNOT1, NOT1	RNA degradation	map03018

Gene Ontology

GO term	Ontology	Name
GO:0006457	biological_process	protein folding
GO:0005524	molecular_function	ATP binding
GO:0051082	molecular_function	unfolded protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	51.344
	SRR3591706	second leaf	25.149
	SRR3591707	mature leaf	21.325
	SRR3591708	Shoot apex	47.016
	SRR3591709	Stem	33.172
	SRR3591710	White floral bud	33.239
	SRR3591711	White flower	40.728
	SRR3591712	Green floral bud	39.141
	SRR3591713	Yellow flower	33.216
SRP173429	SRR8316895	Juvenile bud stage	26.479
	SRR8316896	Juvenile bud stage	35.817
	SRR8316897	Juvenile bud stage	16.991
	SRR8316894	Third green stage	16.315
	SRR8316900	Third green stage	38.541
	SRR8316901	Third green stage	33.195
	SRR8316898	Complete white stage	7.019
	SRR8316899	Complete white stage	29.277
	SRR8316903	Complete white stage	19.082
	SRR8316902	Silver flowering stage	10.519
	SRR8316904	Silver flowering stage	18.005
	SRR8316905	Silver flowering stage	7.316
	SRR8316906	Gold flowering stage	24.182
	SRR8316907	Gold flowering stage	22.367
	SRR8316908	Gold flowering stage	24.721
SRP132670	SRR6706286	Control	33.480
	SRR6706287	Light intensity 50%	36.592
	SRR6706288	Light intensity 20%	40.097
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	23.861
	CNS0095593	Slightly white alabastrum(diploid) 2	23.128
	CNS0095594	Slightly white alabastrum(diploid) 3	19.795
	CNS0095595	Whole white alabastrum(diploid) 2	18.957
	CNS0095596	Whole white alabastrum(diploid) 3	18.576
	CNS0095597	Whole white alabastrum(diploid) 4	15.749
	CNS0095598	Silvery flower (diploied) 1	21.134
	CNS0095599	Silvery flower (diploied) 2	17.877
	CNS0095600	Silvery flower (diploied) 3	30.547
	CNS0095601	Golden flower (diploid) 1	18.054
	CNS0095602	Golden flower (diploid) 2	32.901
	CNS0095603	Golden flower (diploid) 3	31.293
	CNS0095604	Slightly white alabastrum(tetraploid) 1	26.277
	CNS0095605	Slightly white alabastrum(tetraploid) 2	22.141
	CNS0095606	Slightly white alabastrum(tetraploid) 3	45.505
	CNS0095607	Whole white alabastrum(tetraploid) 1	14.430
	CNS0095608	Whole white alabastrum(tetraploid) 2	11.477
	CNS0095609	Whole white alabastrum(tetraploid) 3	35.453
	CNS0095610	Silvery flower (tetraploid) 1	31.913
	CNS0095611	Silvery flower (tetraploid) 2	30.455
	CNS0095612	Silvery flower (tetraploid) 3	24.848
	CNS0095613	Golden flower (tetraploid) 1	13.534
	CNS0095614	Golden flower (tetraploid) 2	24.258
	CNS0095615	Golden flower (tetraploid) 3	27.621
CRA001975	CRR073297	Stem 1	45.598
	CRR073298	Stem 2	40.376
	CRR073299	Stem 3	36.356
	CRR073300	Leaf 1	38.432
	CRR073301	Leaf 2	37.111
	CRR073302	Leaf 3	31.139
	CRR073303	Juvenile bud 1	33.537
	CRR073304	Juvenile bud 2	21.050
	CRR073305	Juvenile bud 3	35.863
	CRR073306	Third green 1	7.767
	CRR073307	Third green 2	5.067
	CRR073308	Third green 3	8.720
	CRR073309	Second white 1	6.026
	CRR073310	Second white 2	10.699
	CRR073311	Second white 3	12.167
	CRR073312	Silver flowering 1	12.780
	CRR073313	Silver flowering 2	11.635
	CRR073314	Silver flowering 3	12.934
	CRR073315	Gold flowering 1	10.902
	CRR073316	Gold flowering 2	18.291
	CRR073317	Gold flowering 3	8.785
	CRR073318	Tawny withering 1	27.414
	CRR073319	Tawny withering 2	22.311
	CRR073320	Tawny withering 3	29.202