Detail information of GWHGAAZE031317


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004495425.11.2422E-162PREDICTED: 65-kDa microtubule-associated protein 3-like [Cicer arietinum]
Swissprottr|Q9FHM4|MA653_ARATH9E-13365-kDa microtubule-associated protein 3
trEMBLtr|A0A068VDM5|A0A068VDM5_COFCA3E-158Coffea canephora DH200=94 genomic scaffold, scaffold_180 {ECO:0000313|EMBL:CDP17778.1}
TAIR10AT5G51600.15E-99Microtubule associated protein (MAP65/ASE1) family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5703592757040876-
GWHAAZE00000009mRNA5703592757040876-
GWHAAZE00000009exon5703592757036217-
GWHAAZE00000009exon5703630257036376-
GWHAAZE00000009exon5703650357036576-
GWHAAZE00000009exon5703708657037173-
GWHAAZE00000009exon5703727757037428-
GWHAAZE00000009exon5703838657038545-
GWHAAZE00000009exon5703862857038798-
GWHAAZE00000009exon5703885857039013-
GWHAAZE00000009exon5703910157039310-
GWHAAZE00000009exon5704005857040264-
GWHAAZE00000009exon5704039257040577-
GWHAAZE00000009exon5704087457040876-
GWHAAZE00000009CDS5704087457040876-
GWHAAZE00000009CDS5704039257040577-
GWHAAZE00000009CDS5704005857040264-
GWHAAZE00000009CDS5703910157039310-
GWHAAZE00000009CDS5703885857039013-
GWHAAZE00000009CDS5703862857038798-
GWHAAZE00000009CDS5703838657038545-
GWHAAZE00000009CDS5703727757037428-
GWHAAZE00000009CDS5703708657037173-
GWHAAZE00000009CDS5703650357036576-
GWHAAZE00000009CDS5703630257036376-
GWHAAZE00000009CDS5703592757036217-
Transcript Sequence

Network for GWHGAAZE031317

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0220


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03999.13MAP65_ASE1572541.70E-22
PF03999.13MAP65_ASE13125764.00E-59
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.250
SRR3591706second leaf3.219
SRR3591707mature leaf3.005
SRR3591708Shoot apex4.650
SRR3591709Stem1.872
SRR3591710White floral bud10.062
SRR3591711White flower9.260
SRR3591712Green floral bud17.456
SRR3591713Yellow flower9.193
SRP173429 SRR8316895Juvenile bud stage 17.312
SRR8316896Juvenile bud stage 27.438
SRR8316897Juvenile bud stage 18.411
SRR8316894Third green stage 11.917
SRR8316900Third green stage 36.573
SRR8316901Third green stage 29.613
SRR8316898Complete white stage 6.274
SRR8316899Complete white stage 33.633
SRR8316903Complete white stage 11.265
SRR8316902Silver flowering stage2.708
SRR8316904Silver flowering stage4.883
SRR8316905Silver flowering stage2.442
SRR8316906Gold flowering stage 6.129
SRR8316907Gold flowering stage 5.228
SRR8316908Gold flowering stage 4.990
SRP132670SRR6706286Control30.744
SRR6706287Light intensity 50%30.395
SRR6706288Light intensity 20%31.534
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.395
CNS0095593Slightly white alabastrum(diploid) 215.818
CNS0095594Slightly white alabastrum(diploid) 312.174
CNS0095595Whole white alabastrum(diploid) 214.628
CNS0095596Whole white alabastrum(diploid) 313.060
CNS0095597Whole white alabastrum(diploid) 413.122
CNS0095598Silvery flower (diploied) 111.556
CNS0095599Silvery flower (diploied) 212.761
CNS0095600Silvery flower (diploied) 317.240
CNS0095601Golden flower (diploid) 110.472
CNS0095602Golden flower (diploid) 216.167
CNS0095603Golden flower (diploid) 313.141
CNS0095604Slightly white alabastrum(tetraploid) 130.935
CNS0095605Slightly white alabastrum(tetraploid) 225.104
CNS0095606Slightly white alabastrum(tetraploid) 355.107
CNS0095607Whole white alabastrum(tetraploid) 116.576
CNS0095608Whole white alabastrum(tetraploid) 216.909
CNS0095609Whole white alabastrum(tetraploid) 350.344
CNS0095610Silvery flower (tetraploid) 125.254
CNS0095611Silvery flower (tetraploid) 232.041
CNS0095612Silvery flower (tetraploid) 315.081
CNS0095613Golden flower (tetraploid) 111.548
CNS0095614Golden flower (tetraploid) 217.449
CNS0095615Golden flower (tetraploid) 312.047
CRA001975CRR073297Stem 121.362
CRR073298Stem 220.148
CRR073299Stem 312.801
CRR073300Leaf 131.234
CRR073301Leaf 228.432
CRR073302Leaf 313.297
CRR073303Juvenile bud 115.159
CRR073304Juvenile bud 210.055
CRR073305Juvenile bud 314.422
CRR073306Third green 10.978
CRR073307Third green 21.152
CRR073308Third green 31.053
CRR073309Second white 11.378
CRR073310Second white 21.841
CRR073311Second white 31.824
CRR073312Silver flowering 10.809
CRR073313Silver flowering 21.903
CRR073314Silver flowering 31.237
CRR073315Gold flowering 12.476
CRR073316Gold flowering 23.740
CRR073317Gold flowering 32.202
CRR073318Tawny withering 12.017
CRR073319Tawny withering 22.509
CRR073320Tawny withering 32.950