Detail information of GWHGAAZE031342


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277837.10PREDICTED: lysophospholipid acyltransferase LPEAT2 isoform X2 [Vitis vinifera]
COGYP_008146522.10.000000001hypothetical protein SCE1572_00225
Swissprottr|Q8S8S2|LPCT2_ARATH0Lysophospholipid acyltransferase LPEAT2
trEMBLtr|F6I355|F6I355_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB61372.1}
TAIR10AT2G45670.17E-173calcineurin B subunit-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5751590557521500-
GWHAAZE00000009mRNA5751590557521500-
GWHAAZE00000009exon5751590557515922-
GWHAAZE00000009exon5751604257516159-
GWHAAZE00000009exon5751626857516338-
GWHAAZE00000009exon5751710257517146-
GWHAAZE00000009exon5751743857517533-
GWHAAZE00000009exon5751773657517804-
GWHAAZE00000009exon5751879957518862-
GWHAAZE00000009exon5751920857519371-
GWHAAZE00000009exon5751971657519775-
GWHAAZE00000009exon5751990157520081-
GWHAAZE00000009exon5752107657521500-
GWHAAZE00000009CDS5752107657521500-
GWHAAZE00000009CDS5751990157520081-
GWHAAZE00000009CDS5751971657519775-
GWHAAZE00000009CDS5751920857519371-
GWHAAZE00000009CDS5751879957518862-
GWHAAZE00000009CDS5751773657517804-
GWHAAZE00000009CDS5751743857517533-
GWHAAZE00000009CDS5751710257517146-
GWHAAZE00000009CDS5751626857516338-
GWHAAZE00000009CDS5751604257516159-
GWHAAZE00000009CDS5751590557515922-
Transcript Sequence

Network for GWHGAAZE031342

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01553.22Acyltransferase1582556.10E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13510LPCAT1_2 Metabolic pathways map01100
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565

Gene Ontology

GO term OntologyName
GO:0016746molecular_functiontransferase activity, transferring acyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.194
SRR3591706second leaf21.409
SRR3591707mature leaf18.443
SRR3591708Shoot apex20.543
SRR3591709Stem25.160
SRR3591710White floral bud25.795
SRR3591711White flower23.480
SRR3591712Green floral bud22.710
SRR3591713Yellow flower23.237
SRP173429 SRR8316895Juvenile bud stage 10.435
SRR8316896Juvenile bud stage 15.342
SRR8316897Juvenile bud stage 8.962
SRR8316894Third green stage 5.700
SRR8316900Third green stage 19.135
SRR8316901Third green stage 18.798
SRR8316898Complete white stage 9.405
SRR8316899Complete white stage 26.024
SRR8316903Complete white stage 18.025
SRR8316902Silver flowering stage9.805
SRR8316904Silver flowering stage13.684
SRR8316905Silver flowering stage7.220
SRR8316906Gold flowering stage 16.521
SRR8316907Gold flowering stage 15.140
SRR8316908Gold flowering stage 17.957
SRP132670SRR6706286Control13.353
SRR6706287Light intensity 50%13.323
SRR6706288Light intensity 20%15.554
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.140
CNS0095593Slightly white alabastrum(diploid) 210.103
CNS0095594Slightly white alabastrum(diploid) 38.438
CNS0095595Whole white alabastrum(diploid) 210.546
CNS0095596Whole white alabastrum(diploid) 310.168
CNS0095597Whole white alabastrum(diploid) 414.376
CNS0095598Silvery flower (diploied) 113.773
CNS0095599Silvery flower (diploied) 210.393
CNS0095600Silvery flower (diploied) 320.635
CNS0095601Golden flower (diploid) 111.415
CNS0095602Golden flower (diploid) 216.529
CNS0095603Golden flower (diploid) 317.041
CNS0095604Slightly white alabastrum(tetraploid) 113.797
CNS0095605Slightly white alabastrum(tetraploid) 210.757
CNS0095606Slightly white alabastrum(tetraploid) 323.992
CNS0095607Whole white alabastrum(tetraploid) 114.021
CNS0095608Whole white alabastrum(tetraploid) 214.712
CNS0095609Whole white alabastrum(tetraploid) 323.975
CNS0095610Silvery flower (tetraploid) 120.871
CNS0095611Silvery flower (tetraploid) 217.167
CNS0095612Silvery flower (tetraploid) 319.914
CNS0095613Golden flower (tetraploid) 110.058
CNS0095614Golden flower (tetraploid) 215.530
CNS0095615Golden flower (tetraploid) 313.657
CRA001975CRR073297Stem 115.690
CRR073298Stem 212.789
CRR073299Stem 311.169
CRR073300Leaf 115.304
CRR073301Leaf 213.869
CRR073302Leaf 311.088
CRR073303Juvenile bud 113.926
CRR073304Juvenile bud 211.931
CRR073305Juvenile bud 313.785
CRR073306Third green 17.247
CRR073307Third green 28.641
CRR073308Third green 36.839
CRR073309Second white 19.384
CRR073310Second white 29.397
CRR073311Second white 36.768
CRR073312Silver flowering 16.461
CRR073313Silver flowering 210.854
CRR073314Silver flowering 39.882
CRR073315Gold flowering 15.109
CRR073316Gold flowering 29.416
CRR073317Gold flowering 33.181
CRR073318Tawny withering 17.206
CRR073319Tawny withering 213.895
CRR073320Tawny withering 310.999