Detail information of GWHGAAZE031345


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002272896.12.0886E-102PREDICTED: transcription factor TCP9 [Vitis vinifera]
Swissprottr|O64647|TCP9_ARATH1E-76Transcription factor TCP9
trEMBLtr|F6I360|F6I360_VITVI3E-102Putative uncharacterized protein {ECO:0000313|EMBL:CCB61377.1}
TAIR10AT2G45680.13E-51TCP family transcription factor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5756316257564229-
GWHAAZE00000009mRNA5756316257564229-
GWHAAZE00000009exon5756316257564229-
GWHAAZE00000009CDS5756316257564229-
Transcript Sequence

Network for GWHGAAZE031345

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP671801.60E-29
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.982
SRR3591706second leaf7.058
SRR3591707mature leaf9.223
SRR3591708Shoot apex15.125
SRR3591709Stem52.835
SRR3591710White floral bud28.435
SRR3591711White flower34.923
SRR3591712Green floral bud14.323
SRR3591713Yellow flower24.440
SRP173429 SRR8316895Juvenile bud stage 37.424
SRR8316896Juvenile bud stage 19.063
SRR8316897Juvenile bud stage 18.089
SRR8316894Third green stage 13.713
SRR8316900Third green stage 31.593
SRR8316901Third green stage 35.394
SRR8316898Complete white stage 6.725
SRR8316899Complete white stage 81.189
SRR8316903Complete white stage 13.257
SRR8316902Silver flowering stage6.019
SRR8316904Silver flowering stage4.418
SRR8316905Silver flowering stage1.983
SRR8316906Gold flowering stage 11.087
SRR8316907Gold flowering stage 18.470
SRR8316908Gold flowering stage 11.074
SRP132670SRR6706286Control34.206
SRR6706287Light intensity 50%33.891
SRR6706288Light intensity 20%27.660
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.523
CNS0095593Slightly white alabastrum(diploid) 241.365
CNS0095594Slightly white alabastrum(diploid) 327.707
CNS0095595Whole white alabastrum(diploid) 226.030
CNS0095596Whole white alabastrum(diploid) 39.262
CNS0095597Whole white alabastrum(diploid) 433.283
CNS0095598Silvery flower (diploied) 1101.226
CNS0095599Silvery flower (diploied) 275.603
CNS0095600Silvery flower (diploied) 355.695
CNS0095601Golden flower (diploid) 193.071
CNS0095602Golden flower (diploid) 276.927
CNS0095603Golden flower (diploid) 374.060
CNS0095604Slightly white alabastrum(tetraploid) 113.008
CNS0095605Slightly white alabastrum(tetraploid) 29.973
CNS0095606Slightly white alabastrum(tetraploid) 325.491
CNS0095607Whole white alabastrum(tetraploid) 19.912
CNS0095608Whole white alabastrum(tetraploid) 25.445
CNS0095609Whole white alabastrum(tetraploid) 315.742
CNS0095610Silvery flower (tetraploid) 111.259
CNS0095611Silvery flower (tetraploid) 29.812
CNS0095612Silvery flower (tetraploid) 331.359
CNS0095613Golden flower (tetraploid) 112.666
CNS0095614Golden flower (tetraploid) 220.275
CNS0095615Golden flower (tetraploid) 37.796
CRA001975CRR073297Stem 130.494
CRR073298Stem 229.201
CRR073299Stem 335.479
CRR073300Leaf 157.996
CRR073301Leaf 274.655
CRR073302Leaf 350.631
CRR073303Juvenile bud 168.259
CRR073304Juvenile bud 2100.092
CRR073305Juvenile bud 3139.880
CRR073306Third green 1111.686
CRR073307Third green 295.380
CRR073308Third green 3113.005
CRR073309Second white 1130.375
CRR073310Second white 2130.084
CRR073311Second white 3125.201
CRR073312Silver flowering 1126.303
CRR073313Silver flowering 2109.341
CRR073314Silver flowering 3104.252
CRR073315Gold flowering 117.586
CRR073316Gold flowering 220.023
CRR073317Gold flowering 314.145
CRR073318Tawny withering 123.795
CRR073319Tawny withering 236.151
CRR073320Tawny withering 366.391