Detail information of GWHGAAZE031357


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011091685.19.366E-151PREDICTED: F-box protein PP2-A13 [Sesamum indicum]
Swissprottr|Q9LEX0|P2A13_ARATH8E-131F-box protein PP2-A13
trEMBLtr|A0A067JXS9|A0A067JXS9_JATCU3E-149Uncharacterized protein {ECO:0000313|EMBL:KDP28687.1}
TAIR10AT3G61060.16E-105phloem protein 2-A13

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5774043457742997-
GWHAAZE00000009mRNA5774043457742997-
GWHAAZE00000009exon5774268657742997-
GWHAAZE00000009exon5774199057742108-
GWHAAZE00000009exon5774043457740860-
GWHAAZE00000009CDS5774268657742997-
GWHAAZE00000009CDS5774199057742108-
GWHAAZE00000009CDS5774043457740860-
Transcript Sequence

Network for GWHGAAZE031357

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14299.7PP21152735.20E-40
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.992
SRR3591706second leaf17.707
SRR3591707mature leaf15.535
SRR3591708Shoot apex32.589
SRR3591709Stem15.822
SRR3591710White floral bud15.252
SRR3591711White flower8.690
SRR3591712Green floral bud22.102
SRR3591713Yellow flower8.358
SRP173429 SRR8316895Juvenile bud stage 7.048
SRR8316896Juvenile bud stage 13.017
SRR8316897Juvenile bud stage 5.910
SRR8316894Third green stage 4.845
SRR8316900Third green stage 12.776
SRR8316901Third green stage 15.154
SRR8316898Complete white stage 8.253
SRR8316899Complete white stage 30.016
SRR8316903Complete white stage 11.798
SRR8316902Silver flowering stage4.492
SRR8316904Silver flowering stage3.534
SRR8316905Silver flowering stage2.225
SRR8316906Gold flowering stage 9.923
SRR8316907Gold flowering stage 9.278
SRR8316908Gold flowering stage 6.980
SRP132670SRR6706286Control17.428
SRR6706287Light intensity 50%17.144
SRR6706288Light intensity 20%17.392
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.174
CNS0095593Slightly white alabastrum(diploid) 224.153
CNS0095594Slightly white alabastrum(diploid) 314.519
CNS0095595Whole white alabastrum(diploid) 214.647
CNS0095596Whole white alabastrum(diploid) 318.973
CNS0095597Whole white alabastrum(diploid) 416.278
CNS0095598Silvery flower (diploied) 117.636
CNS0095599Silvery flower (diploied) 216.526
CNS0095600Silvery flower (diploied) 313.059
CNS0095601Golden flower (diploid) 113.905
CNS0095602Golden flower (diploid) 216.126
CNS0095603Golden flower (diploid) 312.768
CNS0095604Slightly white alabastrum(tetraploid) 113.908
CNS0095605Slightly white alabastrum(tetraploid) 213.675
CNS0095606Slightly white alabastrum(tetraploid) 320.530
CNS0095607Whole white alabastrum(tetraploid) 110.785
CNS0095608Whole white alabastrum(tetraploid) 29.411
CNS0095609Whole white alabastrum(tetraploid) 310.206
CNS0095610Silvery flower (tetraploid) 110.032
CNS0095611Silvery flower (tetraploid) 212.805
CNS0095612Silvery flower (tetraploid) 323.250
CNS0095613Golden flower (tetraploid) 19.504
CNS0095614Golden flower (tetraploid) 29.888
CNS0095615Golden flower (tetraploid) 316.147
CRA001975CRR073297Stem 117.686
CRR073298Stem 216.653
CRR073299Stem 317.743
CRR073300Leaf 122.161
CRR073301Leaf 219.495
CRR073302Leaf 313.580
CRR073303Juvenile bud 120.805
CRR073304Juvenile bud 29.093
CRR073305Juvenile bud 325.935
CRR073306Third green 13.689
CRR073307Third green 24.322
CRR073308Third green 33.989
CRR073309Second white 11.783
CRR073310Second white 22.824
CRR073311Second white 32.361
CRR073312Silver flowering 11.402
CRR073313Silver flowering 22.134
CRR073314Silver flowering 33.592
CRR073315Gold flowering 118.755
CRR073316Gold flowering 220.275
CRR073317Gold flowering 316.327
CRR073318Tawny withering 116.982
CRR073319Tawny withering 213.013
CRR073320Tawny withering 320.782