Detail information of GWHGAAZE031401


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010326475.10PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 4 [Solanum lycopersicum]
Swissprottr|Q9LMM0|GPAT4_ARATH0Glycerol-3-phosphate 2-O-acyltransferase 4
trEMBLtr|K4AZL1|K4AZL1_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g094700.2.1}
TAIR10AT1G01610.13E-115glycerol-3-phosphate acyltransferase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene5842069458425662+
GWHAAZE00000009mRNA5842069458425662+
GWHAAZE00000009exon5842069458420970+
GWHAAZE00000009exon5842175858422128+
GWHAAZE00000009exon5842479258424997+
GWHAAZE00000009exon5842516458425662+
GWHAAZE00000009CDS5842069458420970+
GWHAAZE00000009CDS5842175858422128+
GWHAAZE00000009CDS5842479258424997+
GWHAAZE00000009CDS5842516458425662+
Transcript Sequence

Network for GWHGAAZE031401

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12710.8HAD332128.30E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13508GPAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Glycerolipid metabolismmap00561
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.788
SRR3591706second leaf15.254
SRR3591707mature leaf3.503
SRR3591708Shoot apex13.548
SRR3591709Stem4.917
SRR3591710White floral bud13.526
SRR3591711White flower4.965
SRR3591712Green floral bud22.211
SRR3591713Yellow flower2.404
SRP173429 SRR8316895Juvenile bud stage 7.998
SRR8316896Juvenile bud stage 12.659
SRR8316897Juvenile bud stage 4.193
SRR8316894Third green stage 5.705
SRR8316900Third green stage 25.952
SRR8316901Third green stage 33.929
SRR8316898Complete white stage 16.278
SRR8316899Complete white stage 27.130
SRR8316903Complete white stage 18.662
SRR8316902Silver flowering stage6.016
SRR8316904Silver flowering stage9.562
SRR8316905Silver flowering stage6.237
SRR8316906Gold flowering stage 15.163
SRR8316907Gold flowering stage 17.716
SRR8316908Gold flowering stage 9.557
SRP132670SRR6706286Control42.913
SRR6706287Light intensity 50%43.065
SRR6706288Light intensity 20%47.457
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.373
CNS0095593Slightly white alabastrum(diploid) 25.339
CNS0095594Slightly white alabastrum(diploid) 34.946
CNS0095595Whole white alabastrum(diploid) 26.965
CNS0095596Whole white alabastrum(diploid) 39.867
CNS0095597Whole white alabastrum(diploid) 46.328
CNS0095598Silvery flower (diploied) 16.608
CNS0095599Silvery flower (diploied) 24.139
CNS0095600Silvery flower (diploied) 312.349
CNS0095601Golden flower (diploid) 16.548
CNS0095602Golden flower (diploid) 210.221
CNS0095603Golden flower (diploid) 39.537
CNS0095604Slightly white alabastrum(tetraploid) 19.167
CNS0095605Slightly white alabastrum(tetraploid) 25.043
CNS0095606Slightly white alabastrum(tetraploid) 324.985
CNS0095607Whole white alabastrum(tetraploid) 12.524
CNS0095608Whole white alabastrum(tetraploid) 23.156
CNS0095609Whole white alabastrum(tetraploid) 325.174
CNS0095610Silvery flower (tetraploid) 114.480
CNS0095611Silvery flower (tetraploid) 27.993
CNS0095612Silvery flower (tetraploid) 38.583
CNS0095613Golden flower (tetraploid) 16.828
CNS0095614Golden flower (tetraploid) 210.649
CNS0095615Golden flower (tetraploid) 311.774
CRA001975CRR073297Stem 124.152
CRR073298Stem 227.793
CRR073299Stem 324.976
CRR073300Leaf 138.095
CRR073301Leaf 232.119
CRR073302Leaf 338.148
CRR073303Juvenile bud 121.918
CRR073304Juvenile bud 248.258
CRR073305Juvenile bud 320.706
CRR073306Third green 17.886
CRR073307Third green 27.283
CRR073308Third green 38.347
CRR073309Second white 18.930
CRR073310Second white 28.997
CRR073311Second white 36.721
CRR073312Silver flowering 16.770
CRR073313Silver flowering 28.735
CRR073314Silver flowering 38.665
CRR073315Gold flowering 14.716
CRR073316Gold flowering 25.178
CRR073317Gold flowering 35.335
CRR073318Tawny withering 118.500
CRR073319Tawny withering 27.173
CRR073320Tawny withering 321.516