Gene detail

Detail information of GWHGAAZE031405

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007051777.1	0	Cytochrome P450 86A2 isoform 3, partial [Theobroma cacao]
COG	YP_003101804.1	9E-32	cytochrome P450
Swissprot	tr\|O80823\|C86A8_ARATH	0	Cytochrome P450 86A8
trEMBL	tr\|A0A061DT05\|A0A061DT05_THECC	0	Cytochrome P450 86A2 isoform 3 {ECO:0000313\|EMBL:EOX95934.1} (Fragment)
TAIR10	AT2G45970.1	0	cytochrome P450, family 86, subfamily A, polypeptide 8

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	58447374	58453297	-
GWHAAZE00000009	mRNA	58447374	58453297	-
GWHAAZE00000009	exon	58451806	58453297	-
GWHAAZE00000009	exon	58447374	58447552	-
GWHAAZE00000009	CDS	58451806	58453297	-
GWHAAZE00000009	CDS	58447374	58447552	-

Transcript Sequence
>GWHTAAZE031441 TTACCCGGTCTGATCGAGAACTCCGAAAGATTACACGAGTGGATTGCCGACAACCTCCGTGCATGTGGTGGCACGTACCAGACCTGCATTTGCGCCATTCCCTTCTTGGCCAGGAAGCAGGGCCATGTGACCGTCACGTGCGACCCAAAGAACCTGGAGCACATACTCAAAACCCGGTTCGACAATTACCCTAAAGGTCCTACTTGGCAAGGTGTCTTTCACGATTTGCTAGGCAAAGGGATCTTCAACTCCGACGGCGACACGTGGCTCTTCCAGAGGAAGACAGCTGCCCTCGAGTTTACAACTCGGACCCTACGCCAAGCCATGGCTCGATGGGTGAACAGAGCCATTAAGCTTCGGTTCTGCCCCATTTTGGAGTCGGCTCAGATTTCGGCTCAGCCAATTGATTTACAGGATCTATTGCTTCGGCTCACTTTCGATAACATTTGTGGCTTGGCGTTCGGGAAAGACCCACAAACGCTGGCTCTAGGTCTTCCCGACAACAGCTTCGCCACGGCTTTTGACCGAGCCACCGAGGCTTCATTGCAAAGGTTTATTTTGCCCGAAACTATATGGAAGTTGAAAAAATGGCTTCGGCTGGGTATGGAGGTTGAGCTGAGCCGAAGCCTTGTACACGTGGAAGAGTACTTGTCCAGCGTCATCAATACACGTAAGGAAGAGCTGACGAGTCAGCAGAAAGATAATAATGCTCACCCACACGATGACTTGCTTTCAAGGTTCATGAAGAAAAAACAATCTTATACCGACAAGTTCTTGCAACACGTGGCTCTTAACTTCATCCTAGCTGGACGTGACACGTCATCAGTTGCGCTAACGTGGTTCTTTTGGCTGGTGATCCAAAATCCTATGGTTGAGGAGAATATCCTCCGGGAGATCTGCACCGTCTTGATGAAGACACGTGGTGATGACGCGGCAGCCTGGCTGGAAGAGCCGCTCGACTTTGAGGAAGTTGATCGGTTAATTTACCTAAAAGCTGCACTTTCAGAGACCCTCCGGTTATACCCGTCAGTGCCAGAGGACTCAAAGCATGTAGTCACCGACGATATATTGCCGGATGGCACATTTGTTCCGGCAGGATCGTCAGTGACGTATTCGATCTATTCAGTTGGGAGGATGAAGTCAATATGGGGAGAGGATTGCCTCGATTTCCGTCCGGAGCGGTGGCTATCACCTGACGGGAAGAAACTTGCAATGCACGATTCATACAAGTTCGTGGCATTCAATGCGGGCCCAAGGATTTGTTTGGGGAAGGATTTGGCGTATCTTCAGATGAAGTCGGTGGCAGCGGCGGTGCTTTTGCGCCACCGGTTGATGGTGGTGGCTGGCCACCTGGTGGAGCAAAAGATGTCATTGACTTTGTTCATGAAGTATGGGCTTAAAGTGGAGGTGCAGCATAGGGATTTAGCGGCGGTTGTAGGGAGTATGAAGAGGGAAAGGAAGTTGGAGGGAAAAGTGAATTTTCCGGGAAAATGGATTTTCCCAGAAAGAGTTTTCGAGGGAAAATTCCAGTTATTTCAAAACAAAATGGATAAATCTACAGCCCTGTTGCTGTTTACAGCAACCGTGATTTATTTGATGTGGTTCCCCTTCATCACGCGGTCCCTGAAGGGTCCACGTGTATGGCCCTTACAAGGCAGTTTACCTGACTGA

Network for GWHGAAZE031405

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	40	458	2.60E-64

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15398	CYP86A4S	Metabolic pathways	map01100
K15398	CYP86A4S	Cutin, suberine and wax biosynthesis	map00073

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.431
	SRR3591706	second leaf	2.063
	SRR3591707	mature leaf	0.165
	SRR3591708	Shoot apex	6.726
	SRR3591709	Stem	0.181
	SRR3591710	White floral bud	0.862
	SRR3591711	White flower	0.250
	SRR3591712	Green floral bud	4.643
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	1.044
	SRR8316896	Juvenile bud stage	1.790
	SRR8316897	Juvenile bud stage	0.878
	SRR8316894	Third green stage	2.135
	SRR8316900	Third green stage	7.102
	SRR8316901	Third green stage	7.602
	SRR8316898	Complete white stage	0.110
	SRR8316899	Complete white stage	3.251
	SRR8316903	Complete white stage	0.111
	SRR8316902	Silver flowering stage	0.015
	SRR8316904	Silver flowering stage	0.051
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.024
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.124
SRP132670	SRR6706286	Control	8.585
	SRR6706287	Light intensity 50%	8.033
	SRR6706288	Light intensity 20%	9.432
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.236
	CNS0095593	Slightly white alabastrum(diploid) 2	1.814
	CNS0095594	Slightly white alabastrum(diploid) 3	1.972
	CNS0095595	Whole white alabastrum(diploid) 2	2.879
	CNS0095596	Whole white alabastrum(diploid) 3	3.238
	CNS0095597	Whole white alabastrum(diploid) 4	2.864
	CNS0095598	Silvery flower (diploied) 1	0.414
	CNS0095599	Silvery flower (diploied) 2	0.448
	CNS0095600	Silvery flower (diploied) 3	0.154
	CNS0095601	Golden flower (diploid) 1	0.331
	CNS0095602	Golden flower (diploid) 2	0.374
	CNS0095603	Golden flower (diploid) 3	0.362
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.011
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.093
	CNS0095606	Slightly white alabastrum(tetraploid) 3	8.789
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.233
	CNS0095608	Whole white alabastrum(tetraploid) 2	4.083
	CNS0095609	Whole white alabastrum(tetraploid) 3	8.661
	CNS0095610	Silvery flower (tetraploid) 1	0.095
	CNS0095611	Silvery flower (tetraploid) 2	0.085
	CNS0095612	Silvery flower (tetraploid) 3	0.089
	CNS0095613	Golden flower (tetraploid) 1	0.090
	CNS0095614	Golden flower (tetraploid) 2	0.037
	CNS0095615	Golden flower (tetraploid) 3	0.132
CRA001975	CRR073297	Stem 1	5.798
	CRR073298	Stem 2	6.731
	CRR073299	Stem 3	5.629
	CRR073300	Leaf 1	9.296
	CRR073301	Leaf 2	8.976
	CRR073302	Leaf 3	12.531
	CRR073303	Juvenile bud 1	5.490
	CRR073304	Juvenile bud 2	1.370
	CRR073305	Juvenile bud 3	5.258
	CRR073306	Third green 1	0.042
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.734
	CRR073309	Second white 1	0.047
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.012
	CRR073312	Silver flowering 1	0.076
	CRR073313	Silver flowering 2	0.035
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.447
	CRR073316	Gold flowering 2	0.306
	CRR073317	Gold flowering 3	0.285
	CRR073318	Tawny withering 1	0.273
	CRR073319	Tawny withering 2	0.193
	CRR073320	Tawny withering 3	0.157